PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01550g02017.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 284aa    MW: 32039.5 Da    PI: 7.5579
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01550g02017.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding409e-13135179347
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               +WT+eE++l++ + + +G+g+Wk I+r     +t+ q+ s+ qky
  Peinf101Scf01550g02017.1 135 PWTKEEHQLFLMGLNTFGKGDWKNISRVYVVSKTPTQVASHAQKY 179
                               7*****************************99************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.00863183IPR001005SANT/Myb domain
PROSITE profilePS500905.033181IPR017877Myb-like domain
SuperFamilySSF466891.72E-63381IPR009057Homeodomain-like
CDDcd001670.001483581No hitNo description
PROSITE profilePS5129416.999127184IPR017930Myb domain
SuperFamilySSF466891.22E-16129185IPR009057Homeodomain-like
TIGRFAMsTIGR015574.4E-17132183IPR006447Myb domain, plants
SMARTSM007171.8E-10132182IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.6E-9133181IPR009057Homeodomain-like
CDDcd001677.80E-10135180No hitNo description
PfamPF002493.1E-10135179IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MEWQKFLHSN SQESTFGQLN APHINHEVVE KTGQWTLEEK QVFDNALSKL NPSSPSFFDY  60
VASILPHKSL EEIKNHYLNL FLFPEKNVVA SADDDHDHDH QHYQLPQADD SDMVGKPDSS  120
PQVENDRPRR RKGIPWTKEE HQLFLMGLNT FGKGDWKNIS RVYVVSKTPT QVASHAQKYF  180
NRQNSTTPLG RRRPSINDIQ TVTLAPASTT THQINGTLAQ GASSIPSFHY PYNVAPMSSS  240
HGNFGRFFSG AEASSSSSNN MVQQTNNCNN INIHLKPVSP RPLF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127131PRRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009622214.11e-101PREDICTED: transcription factor DIVARICATA-like
TrEMBLA0A1S4AVQ74e-99A0A1S4AVQ7_TOBAC; transcription factor DIVARICATA-like
STRINGXP_009622214.11e-100(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52342032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11280.27e-36MYB family protein