PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01452g15029.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 172aa    MW: 19477.6 Da    PI: 4.7106
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01452g15029.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.51.3e-071542128
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIa 28
                              +g W+++Ed++l +++  +G g+W++++
  Peinf101Scf01452g15029.1 15 KGLWSPDEDDKLRNYIINHGHGCWSSVP 42
                              678***********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.33E-6942IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.9E-10944IPR009057Homeodomain-like
PROSITE profilePS500906.0281041IPR017877Myb-like domain
PfamPF002495.1E-61543IPR001005SANT/Myb domain
CDDcd001671.88E-41841No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MGCKIVEKTK QKHKKGLWSP DEDDKLRNYI INHGHGCWSS VPINAEGSLA DSDQSGSQVD  60
FPKEHQKSNL PKVLFAEWLC LDKFHGQDFQ NSGTFDLTKN NFGYNNSESQ HAFMHGLLMN  120
EGSYGSCMNQ EVNNGTVDDM FQPQLKFEDS MSANGFEDFM SGEFINTDVM YI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009629823.19e-61PREDICTED: transcription factor LAF1-like
TrEMBLA0A1S4A0X81e-55A0A1S4A0X8_TOBAC; uncharacterized protein LOC107792586
STRINGXP_009629823.13e-60(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48920.14e-14myb domain protein 45