PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01368g03006.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family G2-like
Protein Properties Length: 261aa    MW: 30245.3 Da    PI: 10.671
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01368g03006.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.46.5e-331972255
                   G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                              prlrWtp+LH++Fv+a+e+LGG++kAtPk +l++m+v gLt++hvkSHLQ+YR+
  Peinf101Scf01368g03006.1 19 PRLRWTPDLHHCFVHAIEKLGGQDKATPKLVLQMMDVRGLTISHVKSHLQMYRS 72
                              8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.5E-311575IPR009057Homeodomain-like
PROSITE profilePS5129412.7581575IPR017930Myb domain
SuperFamilySSF466891.27E-151774IPR009057Homeodomain-like
TIGRFAMsTIGR015572.7E-241973IPR006447Myb domain, plants
PfamPF002494.9E-92071IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MGNCGRNGGV RQYIRSKVPR LRWTPDLHHC FVHAIEKLGG QDKATPKLVL QMMDVRGLTI  60
SHVKSHLQMY RSMKSDVNRQ ADRSSTLPRK QSLGDSDYHL QEEEEVCVEQ QKLLSYNSSF  120
SPKERSESPH FNSVQPTKSC LKISFKVLEA MKFKNLKFSR RPNNKMKTGN HQRSANSRAR  180
ERSKMDKRKN ADYHYLCHCT ILQHKEVTHL LQVRLVKQSL HTPTLSIIGI LLLLKSLVLT  240
LIYLLPCVLS DLRLPLKFLF R
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-172074458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-172074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-172074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-172074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-172074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-172074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-172074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-172074458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754437e-53HG975443.1 Solanum pennellii chromosome ch04, complete genome.
GenBankHG9755167e-53HG975516.1 Solanum lycopersicum chromosome ch04, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019223719.15e-77PREDICTED: putative Myb family transcription factor At1g14600
TrEMBLA0A314KXY61e-75A0A314KXY6_NICAT; Putative myb family transcription factor
STRINGXP_009766440.17e-74(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA54332238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.12e-34G2-like family protein