PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01294g01004.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 198aa    MW: 22756.6 Da    PI: 10.0368
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01294g01004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.5e-0589111123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               y+C++C + F+++  L  H++ H
  Peinf101Scf01294g01004.1  89 YECNYCFRNFPTSQALGGHQNAH 111
                               99******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.605.9E-482115IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576678.76E-786116No hitNo description
PROSITE profilePS5015711.38589116IPR007087Zinc finger, C2H2
PfamPF139128.4E-689113IPR007087Zinc finger, C2H2
PROSITE patternPS00028091111IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MEKIKREAHD FMKVESFSQL PFIRASSSAY KEKAIIRLFG KEYCSGYTNM TTSKMSKSAV  60
ETNTVNLGNY IAKESYNVVK KIEESKKKYE CNYCFRNFPT SQALGGHQNA HKKERQKAKR  120
VHLQHHHSTW TNNISNSARF YYGSHHVNYV TSPYSKISSP NDDLKISPEV KTSKSESRFG  180
YEPKKGVQDG QVSLDLHL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019267119.16e-61PREDICTED: zinc finger protein 8-like
TrEMBLA0A314KZD06e-59A0A314KZD0_NICAT; Zinc finger protein 8
STRINGXP_009619423.15e-57(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14731526
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41940.12e-29zinc finger protein 8