PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf01285g03010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | VOZ | ||||||||
Protein Properties | Length: 489aa MW: 54222.7 Da PI: 5.4022 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 422.7 | 5.7e-130 | 208 | 427 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipeceg 82 pppsaflgpkcalwdc+rpa gs+w+q dycs++ha+la neg pg pv+rp gi+lkd+llf+alsak+qgk+vgipeceg Peinf101Scf01285g03010.1 208 PPPSAFLGPKCALWDCPRPAMGSDWCQqshDYCSEYHASLAPNEGYPGSPPVVRPMGIGLKDNLLFQALSAKAQGKDVGIPECEG 292 89***********************976668****************************************************** PP VOZ 83 aatakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfew 167 aat+kspwna+elfdl+++egetirewlffd+prrafesgnrkqrslpdy+grgwhesrkqvm+e+gglkrsyymdpqp++++ew Peinf101Scf01285g03010.1 293 AATTKSPWNAPELFDLKVVEGETIREWLFFDRPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEYGGLKRSYYMDPQPMKNLEW 377 ************************************************************************************* PP VOZ 168 hlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 hlyeyein++da+alyrlelklvd+kks+kgkv+++s+a lqk++grlta Peinf101Scf01285g03010.1 378 HLYEYEINKYDACALYRLELKLVDGKKSPKGKVTNESVAALQKQMGRLTA 427 ************************************************97 PP |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009408 | Biological Process | response to heat | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009631 | Biological Process | cold acclimation | ||||
GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048578 | Biological Process | positive regulation of long-day photoperiodism, flowering | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 489 aa Download sequence Send to blast |
MGKGSKSGAG KSATHQFFKD RAKNRVDDLQ GVFTNLQSAR KESRTYDVGV LEEQVHQMLR 60 EWKAELNEPS PASSLQARTN LNCPRSPFFD IDWSTSGGSR VSSDIYRLLL GEEEDDATSA 120 LAAAKPEPDA QKNDVAGLQQ GSDVPQLLQE QGYQFVDQCK NVPLVLNNAG MNNQGIATQL 180 DDFDQFFPGF DALNLSLEDV LPPIHPSPPP SAFLGPKCAL WDCPRPAMGS DWCQQSHDYC 240 SEYHASLAPN EGYPGSPPVV RPMGIGLKDN LLFQALSAKA QGKDVGIPEC EGAATTKSPW 300 NAPELFDLKV VEGETIREWL FFDRPRRAFE SGNRKQRSLP DYNGRGWHES RKQVMNEYGG 360 LKRSYYMDPQ PMKNLEWHLY EYEINKYDAC ALYRLELKLV DGKKSPKGKV TNESVAALQK 420 QMGRLTADIP LENKRSAKGR AKSNQKDVAT GNMPAAPNRV VPASEGFDYG TGEPSPDYLV 480 DNLGGYYIT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019229404.1 | 0.0 | PREDICTED: transcription factor VOZ1-like | ||||
Refseq | XP_019229405.1 | 0.0 | PREDICTED: transcription factor VOZ1-like | ||||
Refseq | XP_019229406.1 | 0.0 | PREDICTED: transcription factor VOZ1-like | ||||
Swissprot | Q9SGQ0 | 0.0 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A314KL98 | 0.0 | A0A314KL98_NICAT; Transcription factor voz1 | ||||
STRING | XP_009776508.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2818 | 24 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 0.0 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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