PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01169g01016.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 304aa    MW: 33910.8 Da    PI: 4.9299
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01169g01016.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.51.8e-10184203221
                               --SS-EEEEEEE--TT-SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefp 21 
                               +Dgy+WrKYGqK vk+s+fp
  Peinf101Scf01169g01016.1 184 EDGYRWRKYGQKAVKNSPFP 203
                               8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.0E-11168203IPR003657WRKY domain
SuperFamilySSF1182904.71E-12175219IPR003657WRKY domain
PROSITE profilePS5081112.828178219IPR003657WRKY domain
SMARTSM007748.6E-10183218IPR003657WRKY domain
PfamPF031061.8E-6184203IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MESYKEAAVK MEDPMSYFDN IPVTYNHSFT GLMSDYNYGI EGKNNINSSL GFMELLGVQD  60
FCSASVFDVN STLTSTNFEL PKEENYQDPA VSISEKEVKP SLDETKNHLS TVVADSANIL  120
NTPSTPNCSS ISSETNEGHT HTEDAEGEVI AGEQHHDQEQ TKTKQQYREP RVAFMTKSEV  180
DFLEDGYRWR KYGQKAVKNS PFPSIVVTTY EGKHTHPSPM NMMSRPGFYP TRLPSPAAFS  240
LPMQFNNITE SPHPQFNNLI SPLALNLDAA NLVAQHGRRF CTPSVAAAMM GDHQGLLQDL  300
MPPR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY2299923e-37AY229992.1 Capsicum annuum transcription factor CaWRKY1 (WRKY1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019231120.11e-115PREDICTED: probable WRKY transcription factor 23
TrEMBLA0A1J6IQJ41e-114A0A1J6IQJ4_NICAT; Putative wrky transcription factor 23
STRINGXP_009594706.11e-111(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13092479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.13e-26WRKY DNA-binding protein 23