PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01154g01010.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

G2-like

Protein Properties

Length: 291aa MW: 32636.4 Da PI: 9.4369

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01154g01010.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.5	4.7e-31	177	230	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rF++ave LGG+e+AtPk++lelm+ k+Ltl+hvkSHLQ+YR+ Peinf101Scf01154g01010.1 177 PRMRWTSTLHARFLHAVELLGGHERATPKSVLELMDAKDLTLAHVKSHLQMYRT 230 9****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	6.63E-15	174	230	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	3.0E-27	175	230	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.2E-23	177	230	IPR006447	Myb domain, plants
Pfam	PF00249	5.0E-7	178	229	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence Send to blast
MELFPAQPDL SLKISPPNIK PSSAWKRTTI SSSEDGNIDL EFWRRAVDNN SHSSSNSCEL 60 SLSKIPTRPN YSCEPNSAHH SDNLHKYILQ QSNFQIHNQN QGLSPEFGFL RGIPVYHQNS 120 LSKQPFDSTT TAATFPRTSS LACSNINNNN KSIINSSGLL RSRFMSRFPS KRSMRAPRMR 180 WTSTLHARFL HAVELLGGHE RATPKSVLEL MDAKDLTLAH VKSHLQMYRT VKTTDRAAAA 240 ASSGQSEVLD NGWSGDTSED LMLETQYLRN SELAVQGIGN MRREDKDDRG F

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	3e-16	178	232	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	3e-16	178	232	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	3e-16	178	232	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	3e-16	178	232	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	3e-16	178	232	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	3e-16	178	232	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	3e-16	178	232	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	3e-16	178	232	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	3e-16	178	232	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	3e-16	178	232	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	3e-16	178	232	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	3e-16	178	232	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009615772.1	1e-103	PREDICTED: probable transcription factor KAN2 isoform X1
Refseq	XP_009615773.1	1e-103	PREDICTED: probable transcription factor KAN2 isoform X2
Refseq	XP_009615774.1	1e-103	PREDICTED: probable transcription factor KAN2 isoform X3
Refseq	XP_016459614.1	1e-103	PREDICTED: probable transcription factor KAN2 isoform X1
Refseq	XP_016459615.1	1e-103	PREDICTED: probable transcription factor KAN2 isoform X2
Refseq	XP_016459616.1	1e-103	PREDICTED: probable transcription factor KAN2 isoform X3
TrEMBL	A0A1S3Z561	1e-101	A0A1S3Z561_TOBAC; probable transcription factor KAN2 isoform X2
TrEMBL	A0A1S3Z5E6	1e-101	A0A1S3Z5E6_TOBAC; probable transcription factor KAN2 isoform X3
TrEMBL	A0A1S3Z5I7	1e-101	A0A1S3Z5I7_TOBAC; probable transcription factor KAN2 isoform X1
TrEMBL	A0A2G3DCS1	1e-102	A0A2G3DCS1_CAPCH; Putative transcription factor RL9
STRING	XP_009615772.1	1e-102	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2738	22	55

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	3e-46	G2-like family protein