PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01075g04003.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 367aa    MW: 41737.1 Da    PI: 4.9987
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01075g04003.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM65.61.5e-20121413128
                       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeek.ew.yfFskrdkkya..tgkrknratksg 81 
                                G+rF+Ptdeel  +yL k v g ++e++++ ++vd+y   +P d+  + + ++e  ++ yfF+k +k +   +++ k+r +  g
  Peinf101Scf01075g04003.1  12 LGIRFRPTDEELT-RYLMKFVCGMPFECHHIRRDVDLYGNkKPCDFFdELFPEGEPtNVnYFFAKLKKLSDrcKKNFKRRLACGG 95 
                               69**********9.9*************8888999**97549****634333333324459**999887763335556668899* PP

                       NAM  82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               +Wk + + k+v +kkg+l+glk++L f +g++++ e+  W m+ey+l
  Peinf101Scf01075g04003.1  96 TWKGQDSGKDVRNKKGSLIGLKRSLRFQDGNSSD-ENIVWNMKEYSL 141
                               ****************************998887.89********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.24E-197168IPR003441NAC domain
PROSITE profilePS5100522.51310168IPR003441NAC domain
PfamPF023658.2E-1413141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MMSNTCSPNS MLGIRFRPTD EELTRYLMKF VCGMPFECHH IRRDVDLYGN KKPCDFFDEL  60
FPEGEPTNVN YFFAKLKKLS DRCKKNFKRR LACGGTWKGQ DSGKDVRNKK GSLIGLKRSL  120
RFQDGNSSDE NIVWNMKEYS LSDAILKELK QRGKIQHEDI VLCRIKRKLT VHEKKGSSSN  180
NSDQQVPREV ENNNIVVAEQ PIMQLGYCVE GENNYHMDSS CVPVSCLENS NNSVEIITSR  240
FEFVSEHPIV QIERLDDQTD HINSCVPVFN FDQIEFEHEK ANVPSLEEAL SGLKTLLNEN  300
DAYSSLIGLL TSTEELFQFP DVAEGGAYSV VQPMVQDTNN IIMSANEDMN NSTANQVCCE  360
VQTVNIL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18390KKNFKRRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13516214
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.15e-16NAC domain containing protein 2