PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00984g04021.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 292aa    MW: 32622.1 Da    PI: 8.5771
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00984g04021.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00021221243223
                               EETTTTEEESSHHHHHHHHHH.T CS
                   zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                               +Cp C+ +Fs+   L++H ++ H
  Peinf101Scf00984g04021.1 221 QCPQCTLRFSSVTALVNHVQKvH 243
                               7******************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1183109.81E-12457No hitNo description
PROSITE profilePS510397.3991059IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.103.7E-101153IPR000058Zinc finger, AN1-type
SMARTSM001540.0021352IPR000058Zinc finger, AN1-type
PfamPF014282.1E-121351IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.102.0E-1090148IPR000058Zinc finger, AN1-type
SuperFamilySSF1183102.22E-993149No hitNo description
PROSITE profilePS510397.95998145IPR000058Zinc finger, AN1-type
SMARTSM001540.0078101142IPR000058Zinc finger, AN1-type
PfamPF014285.3E-8101141IPR000058Zinc finger, AN1-type
PROSITE patternPS000280222243IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MGTPAFPNLG KHCSKHDCRQ IDFLPFTCDS CHQVFCLEHR SYNRHQCPTA NKNDVTVVVC  60
PLCAKGVRLF PDEDPNITWE SHVNTECDPS NYEKATKKRK CPVPRCREIL TFSNTIKCRE  120
CTVDHCLKHR FGPDHNCPGR KKPESAFQFM NFRAGSRKEE PNKAAATSSS SWATTLFKAA  180
ETGMAKLSSE FSQTLQMGKD GRGQSSSATN RSGTANGQVE QCPQCTLRFS SVTALVNHVQ  240
KVHEKNGVMN LTIDVCPRCC KGFRDPVSLV EHLIGNTKEL QRHRGDQCKG IT
Functional Description ? help Back to Top
Source Description
UniProtMay be involved in environmental stress response. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754491e-145HG975449.1 Solanum pennellii chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009765392.11e-176PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like
RefseqXP_016478515.11e-176PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like
SwissprotQ8VZ421e-114SAP11_ARATH; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
TrEMBLA0A1S4APP01e-174A0A1S4APP0_TOBAC; zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like
TrEMBLA0A1U7VBI41e-174A0A1U7VBI4_NICSY; zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like
STRINGXP_009765392.11e-175(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53112237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-114C2H2 family protein