PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00959g02031.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 571aa    MW: 59573.9 Da    PI: 9.4982
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00959g02031.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.41.4e-07174219145
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHH CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwq 45 
                               r++W+  Ed  l+ av++ G g+W+ I +      Rt  q+  rw 
  Peinf101Scf00959g02031.1 174 RKPWSDAEDMELIAAVQKCGEGNWANILKGDFkGDRTTSQLSQRWA 219
                               789************************9742224888888888885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.718169226IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.9E-13170225IPR009057Homeodomain-like
SuperFamilySSF466894.95E-12171224IPR009057Homeodomain-like
SMARTSM007177.8E-9173224IPR001005SANT/Myb domain
PfamPF002493.0E-6174220IPR001005SANT/Myb domain
CDDcd116605.50E-15175223No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    Send to blast
MTVLTLLQEV AQVQDSKFDW DELVKKTTTG ITNAREYQML WRHLAYRHGL LDKLDDSAQP  60
MDDDSDLEYE LEALPPVSNE ASVEAAACVK VLIASGVPCD SDMPNENTVE APLTINIPNG  120
QTSRTGTDNS LNGTSVYGTK ITVPVTVPLP SVKAAEGLDI NGPASATFPA RRKRKPWSDA  180
EDMELIAAVQ KCGEGNWANI LKGDFKGDRT TSQLSQRWAT IRKRHGNTIG NGSQLSEAQL  240
AARHAMSMAL GDNLRAACPI STNGPNVGGA PSKSSHFAAA GNASGGPKSE HQQDLVPPKP  300
RVIPKIPSTK PAISPDSMVK AAAVAAGARI STPAGASSLQ NAALSKKVVH IMPGGTPAVK  360
SSVPGSSTGL PSNVHFIRTG LASRPAGPSN ASPSGPQQLQ GQPRSLRPAS PAVQPNSAAV  420
TSRPHASSGV RGAPTSSPVT VLEVKTKAAT VQQNHTAVLS NKRNEKVEVN RAASKGNTPQ  480
LQVLKDQTAA SGNLLAEKVE GKTSTSGDAM IEHGGESKAS RIQVQEKLIL GLEAASSNSI  540
GKQGQASNKI ENTKIDLTVE NSSVQGPAPE T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009795383.10.0PREDICTED: uncharacterized protein LOC104242090
RefseqXP_016460255.10.0PREDICTED: uncharacterized protein LOC107783722
TrEMBLA0A1S3Z7030.0A0A1S3Z703_TOBAC; uncharacterized protein LOC107783722
TrEMBLA0A1U7XWR60.0A0A1U7XWR6_NICSY; uncharacterized protein LOC104242090
STRINGXP_009795383.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34342237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.11e-75MYB_related family protein