PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00829g00005.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Dof
Protein Properties Length: 284aa    MW: 31318.6 Da    PI: 8.0061
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00829g00005.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.48.9e-402280563
                    zf-Dof  5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                               ++cprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  Peinf101Scf00829g00005.1 22 PINCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 80
                              689****************************************************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-271777IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.4132377IPR003851Zinc finger, Dof-type
PfamPF027011.3E-332377IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102561IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MLVSTKPQQQ DFKKPRPAEQ LPINCPRCDS TNTKFCYYNN YSLSQPRYFC KSCRRYWTKG  60
GTLRNVPVGG GCRKNKRSSS SSSKSTSQDH SINTSPNNPI SSLTQMSYDS SDLTLAFASL  120
QKQTSGHLGI HENHNISMMC NGNTGTSADF LESIRGGSFL QNQNGFHHQN LYYGIGSNGD  180
IGNVENDGNY MGVNVSEEMG NMHYDQEMSS GATTTTTATA VTAVKQEMCN MAREGPNDNR  240
VLWGFPWQIN GDGNNTMGDF DSSRRIWNGV GGPSWHGLLN SPLM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755183e-67HG975518.1 Solanum lycopersicum chromosome ch06, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009622795.11e-127PREDICTED: dof zinc finger protein DOF2.1-like
RefseqXP_016492247.11e-127PREDICTED: dof zinc finger protein DOF2.1-like
TrEMBLA0A1S4BTN81e-126A0A1S4BTN8_TOBAC; dof zinc finger protein DOF2.1-like
STRINGXP_009622795.11e-126(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28510.11e-45Dof family protein