PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00809g02027.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 579aa    MW: 65112.1 Da    PI: 5.1121
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00809g02027.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.21.3e-52101471128
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k...........kvkaeekewyfFskrdkkyatgkr 73 
                               l+pGfrFhPtdeelv +yL++kv gk+l++ ++i+++diykvePwdLp k           ++++++ ewyfFs  dkky +g+r
  Peinf101Scf00809g02027.1  10 LAPGFRFHPTDEELVRYYLRRKVCGKPLRI-DAISDIDIYKVEPWDLPvKlsvkygalgmsRLNTRDLEWYFFSMLDKKYGNGSR 93 
                               579***************************.99***************54899999888776667888***************** PP

                       NAM  74 knratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               +nrat++gyWk+tgkd+++++ k+++v +kktLv+++grapkg++t+Wvmhey+l
  Peinf101Scf00809g02027.1  94 TNRATEQGYWKTTGKDRAIHH-KSQVVAMKKTLVYHSGRAPKGQRTNWVMHEYKL 147
                               *********************.999****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-587170IPR003441NAC domain
PROSITE profilePS5100555.85810170IPR003441NAC domain
PfamPF023655.1E-2712147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009644Biological Processresponse to high light intensity
GO:0009962Biological Processregulation of flavonoid biosynthetic process
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 579 aa     Download sequence    Send to blast
MESRGSWKLL APGFRFHPTD EELVRYYLRR KVCGKPLRID AISDIDIYKV EPWDLPVKLS  60
VKYGALGMSR LNTRDLEWYF FSMLDKKYGN GSRTNRATEQ GYWKTTGKDR AIHHKSQVVA  120
MKKTLVYHSG RAPKGQRTNW VMHEYKLVDE ELHKAGISQD AFVLCRVFQK SGAGPKNGEK  180
YGAPFVEEEW EDDELQMVPK PETTTEVEYG DIYLDGYELE QILGTETPAD NVPTHMNCSD  240
GKSGTYCEEA NDCSEDAQKW LQQQNELKPF DPAVQHTANN PLEHEYIGES GKQLNSGFVD  300
YLLNGPLDDS SDALQFNDGA FLEANDLSNP VEVDNSGYDM FEEYLTYFDA NDDFQNMGFD  360
GFDPSVLIGN DGHVSDLASL LEKNIGEVAQ QVTAPSQQLA EHKNTIASSS MEKPTKFVTA  420
DDQYRFMKRA SQMLGSIPAP PAFASEFPTK DAALHLNSMP HSANSVRVTA GVIQIRNNWS  480
LGKHGYYNII LSFGLCQGSD SSANPESVAN SSPGKATSMV SRGWFSYLFF WVLILSMSFK  540
IGTLICARCL FPPLRRNSWQ VIWTTYLLTK ILTIHVPIA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A1e-441017620174NAC domain-containing protein 19
3swm_B1e-441017620174NAC domain-containing protein 19
3swm_C1e-441017620174NAC domain-containing protein 19
3swm_D1e-441017620174NAC domain-containing protein 19
3swp_A1e-441017620174NAC domain-containing protein 19
3swp_B1e-441017620174NAC domain-containing protein 19
3swp_C1e-441017620174NAC domain-containing protein 19
3swp_D1e-441017620174NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00059PBMTransfer from AT5G04410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF5098720.0AF509872.1 Petunia x hybrida nam-like protein 9 (NH9) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009599412.10.0PREDICTED: NAC domain-containing protein 53-like isoform X1
TrEMBLQ8LRL60.0Q8LRL6_PETHY; Nam-like protein 9
STRINGXP_009599412.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31412450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-141NAC domain containing protein 2