PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00782g02035.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 308aa    MW: 34744.8 Da    PI: 5.8388
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00782g02035.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.23.8e-24126187159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                               +dDg++WrKYGqK++ +s++pr+Y+rCt++   +C+++k+v++ +++p ++++tY g+H ++
  Peinf101Scf00782g02035.1 126 VDDGHAWRKYGQKQILNSTYPRHYFRCTHKydqKCQATKQVQKIQDNPPLFKTTYYGQHICK 187
                               59***************************99999*************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.8E-25112187IPR003657WRKY domain
PROSITE profilePS5081119.589121184IPR003657WRKY domain
SuperFamilySSF1182906.8E-24123187IPR003657WRKY domain
SMARTSM007743.6E-35126188IPR003657WRKY domain
PfamPF031066.5E-23127187IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MEYSPLPENS STDLKRAIEG LIRGRELTQR LKEIMKKPLE DGVTTNIMAE NLVVKIMDSF  60
SETISMINSG DLDEVSQVTA ISSPSSEKSS EDSSGSCKGS SLKDRRGCYK RRKTLEINIK  120
ESSALVDDGH AWRKYGQKQI LNSTYPRHYF RCTHKYDQKC QATKQVQKIQ DNPPLFKTTY  180
YGQHICKAFP RESQIILDTQ IDGDSSIILN FDQKSINHNY HPYNNNGPTF PSIKQETKEE  240
VLQISSNSHY FLPANDHMTP ATIEASGSHM AAALSPEVIS SGGVYSSCTS SDNLDIDIDF  300
EEYIWNFE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-22126187869OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU0569183e-92EU056918.1 Solanum tuberosum WRKY transcription factor 6 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019228516.11e-149PREDICTED: probable WRKY transcription factor 70
TrEMBLA0A314KN781e-148A0A314KN78_NICAT; Putative wrky transcription factor 70
STRINGXP_009597703.11e-148(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA42302143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-35WRKY DNA-binding protein 70