PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00755g05001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 263aa    MW: 29811.2 Da    PI: 5.2431
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00755g05001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.3e-20104154155
                       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                               ++++GVr+++ +grW+AeIrdp+    r kr++lg+++t+eeAa  +++a+  ++g
  Peinf101Scf00755g05001.1 104 KKFRGVRQRP-WGRWAAEIRDPT----RgKRVWLGTYDTPEEAATVYDRAAVMIKG 154
                               59********.**********84....35*********************977665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381233.7E-791263IPR017392AP2/ERF transcription factor ERF/PTI6
CDDcd000183.93E-33104162No hitNo description
PfamPF008473.2E-13105152IPR001471AP2/ERF domain
SMARTSM003802.3E-38105168IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.8E-30105163IPR001471AP2/ERF domain
PROSITE profilePS5103223.762105162IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-22105163IPR016177DNA-binding domain
PRINTSPR003678.5E-10106117IPR001471AP2/ERF domain
PRINTSPR003678.5E-10128144IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042991Biological Processtranscription factor import into nucleus
GO:0048366Biological Processleaf development
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MTLQPPVKFS EHIVTTNKHV HELNKRSSTH PQKVVRIILT DGDATDSSDD DEEQYMVRRV  60
KRYVTEINFT HQLPQSPKQD SSQPQTSNKK RSLPSSGNDV SSRKKFRGVR QRPWGRWAAE  120
IRDPTRGKRV WLGTYDTPEE AATVYDRAAV MIKGPDAVTN FPLVSPPTKH IKELTELKPE  180
PIVDSQVKST QVASKDEALS PTSVLRSDDF APFDDFGFSE LDAFGFDIDI DSTFGLAGFG  240
MSEKYFAEEF SEFDFDDFSL EVR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-21104163161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A3e-21104163464ATERF1
3gcc_A3e-21104163464ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Activates the defense genes of plants. {ECO:0000269|PubMed:11971137}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00456DAPTransfer from AT4G27950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009592172.11e-139PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like
SwissprotO046821e-84PTI6_SOLLC; Pathogenesis-related genes transcriptional activator PTI6
TrEMBLA0A1S4BF981e-137A0A1S4BF98_TOBAC; pathogenesis-related genes transcriptional activator PTI6-like
TrEMBLA0A1U7VYC21e-137A0A1U7VYC2_NICSY; pathogenesis-related genes transcriptional activator PTI6-like
STRINGXP_009592172.11e-138(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52272137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.27e-32cytokinin response factor 2