PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00748g00019.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 336aa    MW: 37424.8 Da    PI: 9.7159
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00748g00019.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.83.1e-30265322359
                               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ ++p+++++tYegeH h+
  Peinf101Scf00748g00019.1 265 DDYSWRKYGQKPIKGSPHPRAYYKCSSLkGCPARKHVERALDEPTILIVTYEGEHIHS 322
                               99************************998***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105335.1E-18214261IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.1E-31251322IPR003657WRKY domain
PROSITE profilePS5081129258324IPR003657WRKY domain
SuperFamilySSF1182901.07E-25260322IPR003657WRKY domain
SMARTSM007741.1E-35263323IPR003657WRKY domain
PfamPF031061.3E-25265321IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MAVELMMNYR DTSNRNISNN STILMTNLEE KAAVLQEADS GLESVEKLIK LLSQSHSQQK  60
QGNFLTSYQE HQETSPMEIK FVADAAVNKF KNVISLLGRS KIGHARFRRA PIAPIDAKIY  120
CPTPLQQVPP VAYELYNHQY YQVPTNELVV KQEMITKNID FSCAKNISRS HSFSVSTITG  180
EPESCKQLSK SSSFQISNLS SAGKPPLSSS SSFKRRCSSS ENGISGMCSV SSGGRCHCSK  240
KRKLRLKRVV RVPAISMKMS DIPPDDYSWR KYGQKPIKGS PHPRAYYKCS SLKGCPARKH  300
VERALDEPTI LIVTYEGEHI HSLSVAETSS LILESS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-20251323273WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAJ5388761e-48AJ538876.1 Nicotiana tabacum cDNA-AFLP-fragment BT2-M23-021.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019241749.11e-168PREDICTED: probable WRKY transcription factor 15
TrEMBLA0A1J6KB261e-165A0A1J6KB26_NICAT; Putative wrky transcription factor 7
STRINGXP_009600092.11e-164(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12202479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.17e-65WRKY DNA-binding protein 15