PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00643g02009.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 509aa    MW: 58118.1 Da    PI: 10.7519
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00643g02009.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.31.5e-071750438
                              S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HH CS
           Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlk 38
                              W t+E+++l  av+++G+++W+ +a+++   Rtl+
  Peinf101Scf00643g02009.1 17 WGTWEELILGGAVRRHGTNDWNVVASELR-SRTLY 50
                              9****************************.99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.039967IPR017877Myb-like domain
SuperFamilySSF466891.47E-51067IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.9E-51268IPR009057Homeodomain-like
PfamPF002491.8E-51765IPR001005SANT/Myb domain
CDDcd001672.26E-41763No hitNo description
SuperFamilySSF473703.92E-18270380IPR001487Bromodomain
SMARTSM002976.4E-17276380IPR001487Bromodomain
Gene3DG3DSA:1.20.920.104.1E-16279400IPR001487Bromodomain
CDDcd043692.16E-14279375No hitNo description
PfamPF004392.5E-10285364IPR001487Bromodomain
PROSITE profilePS5001410.401291361IPR001487Bromodomain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 509 aa     Download sequence    Send to blast
MEWGVGPMRK KKKMNWWGTW EELILGGAVR RHGTNDWNVV ASELRSRTLY PFRFTPQACK  60
ARYEDLLSYL FDLLLASAWF EELRKRRVEE LKRELERSES SIGSLESKIE RLKAERERSG  120
QIDYGLSHTE SPAPLMKSED IESSAKDEAK DGLSAGSFTL DIRTHRSPES QIPTIPSSTE  180
TDLIKLERSE SCERNKIQRI NKVTEAANGN GGAIRKRRGK RRRKDTVWDA KEGSIEESDN  240
VCSTSLASTS HCKEVLTSCD QSIRHSAASN HRGGLSRFRN DDLMRIFNSI TQHEAAMVFR  300
HRLDSQKRAR YKKMIRRHMD IEIVRSRLAS WSIKTPGELF RDFLLLANNA MVFYSKRTRE  360
YKAAMALRDI VTRAYRQHYK GSYYKATSSL LPFPTIGNPP GKPRSVRPRP SKDKLQAKYG  420
NNVKDISAGT LGGQNHRPSD ADSKVPLQSL LTAKKGSKRP GKIKRGAINE SVNPQTKVLA  480
KEATQHNVRT KEDHIINPVT KERKRARQK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1216224RRGKRRRKD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019262734.10.0PREDICTED: uncharacterized protein LOC109240533
TrEMBLA0A314L9430.0A0A314L943_NICAT; Uncharacterized protein
STRINGXP_009778975.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55341924
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42150.18e-15DNA-binding bromodomain-containing protein