PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00586g08009.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

NAC

Protein Properties

Length: 413aa MW: 47007.1 Da PI: 4.8146

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00586g08009.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	76.3	7.4e-24	8	138	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykv.ePwdLp.kkvkaeek.ew.yfFskrdkkyatgkrknr.atks 80 + G+rF+Ptdeelv +yL k v + ++e+ + i++ d+y +P +L + + +++ ++ yfF++ +kk+ + k nr ++ Peinf101Scf00586g08009.1 8 TLGVRFRPTDEELV-RYLMKFVCDAPFEC-NYIRSNkDLYGDkKPYELFdELFPQGDPtDVnYFFAQLKKKSVRHKYFNRtLIRG 90 67**********.9*********.5565555999754963434343333445***************8899 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 g Wk kdk+v++kkg+++g kk++ f ++++++ge W m+ey l Peinf101Scf00586g08009.1 91 GSWKGLDKDKKVTNKKGSVIGSKKSFRFKEEKSSDGETIVWNMKEYCL 138 **********************************************87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	9.55E-25	5	165	IPR003441	NAC domain
PROSITE profile	PS51005	27.825	7	165	IPR003441	NAC domain
Pfam	PF02365	8.4E-14	10	138	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence Send to blast
MSNDYLLTLG VRFRPTDEEL VRYLMKFVCD APFECNYIRS NKDLYGDKKP YELFDELFPQ 60 GDPTDVNYFF AQLKKKSVRH KYFNRTLIRG GSWKGLDKDK KVTNKKGSVI GSKKSFRFKE 120 EKSSDGETIV WNMKEYCLSN KILEELRQRG QIRHEDYVLC RIKRKVKAVY HQKEVGQRAQ 180 PIYSEEEENI GINNSDQHNI VLADDQQPMV GSDQLPMCTS ENMQVMKKNL QNYFDSFASL 240 ISSSDVPMET SSTTGDSNNI VVANQQQPMQ LGCQEDQTYY MDYSCVPNNN SGEIITSCYL 300 SLLTSSEELN TTERGEGFAA FVREITGGSI SNEDQQFENT NNCDTESSVA STDINNYSSW 360 DLLHAQAGIN GQHNDSVPDL LDQSSVSSHG YDEVAGYHRG FDSYTSAILQ STR

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence Send to blast

MSNDYLLTLG VRFRPTDEEL VRYLMKFVCD APFECNYIRS NKDLYGDKKP YELFDELFPQ  60
GDPTDVNYFF AQLKKKSVRH KYFNRTLIRG GSWKGLDKDK KVTNKKGSVI GSKKSFRFKE  120
EKSSDGETIV WNMKEYCLSN KILEELRQRG QIRHEDYVLC RIKRKVKAVY HQKEVGQRAQ  180
PIYSEEEENI GINNSDQHNI VLADDQQPMV GSDQLPMCTS ENMQVMKKNL QNYFDSFASL  240
ISSSDVPMET SSTTGDSNNI VVANQQQPMQ LGCQEDQTYY MDYSCVPNNN SGEIITSCYL  300
SLLTSSEELN TTERGEGFAA FVREITGGSI SNEDQQFENT NNCDTESSVA STDINNYSSW  360
DLLHAQAGIN GQHNDSVPDL LDQSSVSSHG YDEVAGYHRG FDSYTSAILQ STR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G3C863	9e-61	A0A2G3C863_CAPCH; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA13516	2	14

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	2e-16	NAC domain containing protein 2