PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00562g09013.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

NAC

Protein Properties

Length: 374aa MW: 41621.6 Da PI: 7.0932

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00562g09013.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	46.3	1.4e-14	7	55	2	50
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkk 50 pGfrFhPt+eel+++yLk++++++kl ++vi v+iy ++Pw+Lp++ Peinf101Scf00562g09013.1 7 LPGFRFHPTEEELINFYLKRSIKDNKLLDSNVIGFVNIYLHDPWELPAT 55 59**********************877799************942 PP
2	NAM	42.7	1.7e-13	54	99	85	128
NAM 85 atgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 atg+d ++ s+ ++++glkktLvfy grapkg++tdWvm+eyrl Peinf101Scf00562g09013.1 54 ATGTDSQIRSSidLKKVIGLKKTLVFYGGRAPKGSRTDWVMNEYRL 99 68999999998877788***************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	19.65	1	119	IPR003441	NAC domain
SuperFamily	SSF101941	2.88E-31	5	119	IPR003441	NAC domain
Pfam	PF02365	4.1E-14	8	99	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence Send to blast
MSLDEHLPGF RFHPTEEELI NFYLKRSIKD NKLLDSNVIG FVNIYLHDPW ELPATGTDSQ 60 IRSSIDLKKV IGLKKTLVFY GGRAPKGSRT DWVMNEYRLP DGRPLPKDHD IVLCKVYRKA 120 TSFKVLEQRA IIEEHTTKRS SKTLSSPQSL YMYGALVPHD DLESAISQND TSISFKNLEE 180 ENHNTTVKLP QLSSSNAFVE PPKYNMDSFP TPLWTEQKSS GHDLWSKIRY FLVSLTLTLP 240 SLPPPPPLLP PLRRLAPQAA PFFFDDDRLS AVAATDQSCC CLVVVVRHGS VPPSSQLTID 300 LMDEQWLDKP GTRRAAESAA DGVHLPVMTL CADGFGCWGV IQNHKAVLND TTGSLATKSG 360 LFSRSLPIAL PAGP

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence Send to blast

MSLDEHLPGF RFHPTEEELI NFYLKRSIKD NKLLDSNVIG FVNIYLHDPW ELPATGTDSQ  60
IRSSIDLKKV IGLKKTLVFY GGRAPKGSRT DWVMNEYRLP DGRPLPKDHD IVLCKVYRKA  120
TSFKVLEQRA IIEEHTTKRS SKTLSSPQSL YMYGALVPHD DLESAISQND TSISFKNLEE  180
ENHNTTVKLP QLSSSNAFVE PPKYNMDSFP TPLWTEQKSS GHDLWSKIRY FLVSLTLTLP  240
SLPPPPPLLP PLRRLAPQAA PFFFDDDRLS AVAATDQSCC CLVVVVRHGS VPPSSQLTID  300
LMDEQWLDKP GTRRAAESAA DGVHLPVMTL CADGFGCWGV IQNHKAVLND TTGSLATKSG  360
LFSRSLPIAL PAGP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009606805.1	1e-104	PREDICTED: NAC domain-containing protein 35-like isoform X2
TrEMBL	A0A1S4D881	1e-102	A0A1S4D881_TOBAC; putative NAC domain-containing protein 94 isoform X2
STRING	XP_009606805.1	1e-104	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3531	22	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	2e-48	NAC domain containing protein 36