PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00500g05005.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 470aa    MW: 53116.6 Da    PI: 8.6454
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00500g05005.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.0002792111221
                               EETTTTEEESSHHHHHHHHH CS
                   zf-C2H2   2 kCpdCgksFsrksnLkrHir 21 
                               +C+ Cgk+F ++  L  H++
  Peinf101Scf00500g05005.1  92 VCKECGKRFQSWKALFGHMK 111
                               6******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139121.4E-6832IPR007087Zinc finger, C2H2
SMARTSM003550.057931IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.598931IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.603.4E-4931IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576676.67E-9931No hitNo description
PROSITE patternPS0002801131IPR007087Zinc finger, C2H2
SuperFamilySSF576676.67E-986113No hitNo description
SMARTSM003550.01291113IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.82791116IPR007087Zinc finger, C2H2
PROSITE patternPS00028093113IPR007087Zinc finger, C2H2
PfamPF139122.8E-893115IPR007087Zinc finger, C2H2
SMARTSM003550.09317339IPR015880Zinc finger, C2H2-like
SuperFamilySSF576672.4E-7317339No hitNo description
PROSITE profilePS5015710.658317344IPR007087Zinc finger, C2H2
PfamPF139128.8E-11317341IPR007087Zinc finger, C2H2
PROSITE patternPS000280319339IPR007087Zinc finger, C2H2
SuperFamilySSF576672.4E-7379406No hitNo description
SMARTSM003550.29384406IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.785384406IPR007087Zinc finger, C2H2
PfamPF139122.3E-9384407IPR007087Zinc finger, C2H2
PROSITE patternPS000280386406IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
MKQDQELRHV CKFCNKSFPC GRSLGGHMRT HLINISAFDD HKNEKYTKKK LPSIEATSSK  60
FADYGLRENH KKTSKFVESS EEDTLLQNQN KVCKECGKRF QSWKALFGHM KCHSDKIVSS  120
MNSTVDEESW NNDANYAIHK QVILDSQSDN ETAVPNRKKR SSRKLKRYMT STTTSSNITV  180
VNVSPCLSEI EQEQEEVAMS LIILSRDVGN WIGLNPYTEF SGSSQPHQTE DGVLVKLKKV  240
QNEKPEQGET SKSNVKACGV PRNGHKMENS FVQAKETKVE ESTKKRNFEL TEGDFSVTSN  300
TKKLNDHASD SEKKLKFQCT TCNKSFHSYQ ALGGHSTSHR KTKDLQNQAT DSKIIKNSSK  360
NNSTIDEFGE KDESFSVSKK LKGYECPLCF KIFQSGQALG GHKRSHLIAE AKSNNQVVMI  420
EKPIPEIRDF LDLNLPAPVE EESTSEHVGF QPWWIGSSHK HEQLVGLISN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0066060.0AB006606.1 Petunia x hybrida mRNA for ZPT4-4, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016515360.10.0PREDICTED: zinc finger protein ZAT9-like isoform X1
TrEMBLO220910.0O22091_PETHY; ZPT4-4
STRINGXP_009801846.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44812241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.13e-26C2H2-like zinc finger protein