PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00461g04013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | NAC | ||||||||
Protein Properties | Length: 329aa MW: 37448 Da PI: 4.8838 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 32 | 3.7e-10 | 12 | 74 | 66 | 128 |
NAM 66 kkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +k+ gk+ nr +++ g Wka ++k+v++kkg+++g kt+ f ++++++ ++ +W+m+ey l Peinf101Scf00461g04013.1 12 RKTVCGKNFNRkVAAGGSWKARDTKKQVHDKKGAVIGFMKTFRFDEENSSE-KNIQWTMKEYCL 74 56667899999778899***************************9655555.89********87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 16.59 | 1 | 101 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.14E-11 | 14 | 101 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.1E-5 | 20 | 74 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence Send to blast |
MLLQPEVWLL KRKTVCGKNF NRKVAAGGSW KARDTKKQVH DKKGAVIGFM KTFRFDEENS 60 SEKNIQWTMK EYCLSDIVLK ELRQGCQIRH EDYVLCRMRR KVKFCSKNRQ DGENVVANVK 120 VENLDNAPSF SEDYSQLQES QDLGHANANV KVENLDNVPS FSEDHGQLQE SQDLGHANAT 180 VSSAQLKNLH GGEDFSVDIL KDQNHDLDVP SCSSIHGNTK SPVPLQENSA PSDYIQLSNF 240 LNEKEKWCSL VSLLTTESNI YDPIAQLPLF IEQEQFYVPM VQDIPSNCAN KEPLEESRLP 300 MFPEPVQSLT EEELAFFDKP DPEYPHANI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA25001 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22290.1 | 1e-06 | NAC domain containing protein 89 |