PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00457g28014.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 493aa    MW: 55044.5 Da    PI: 9.4778
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00457g28014.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.62.2e-32206262360
                               -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                               DgynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkvers+ d+++ ei+Y+geHnh+k
  Peinf101Scf00457g28014.1 206 DGYNWRKYGQKQVKGSEYPRSYYKCTHLKCPVKKKVERSH-DGQIAEIVYRGEHNHPK 262
                               9***************************************.***************85 PP
2WRKY101.74.2e-32412468258
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                               +Dg++WrKYGqK+vkg+ +prsYYrCts++C+v+k vers +dp+++++tYeg+Hnh
  Peinf101Scf00457g28014.1 412 EDGFRWRKYGQKVVKGNSYPRSYYRCTSPKCNVRKFVERSIDDPNALITTYEGKHNH 468
                               7******************************************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.4E-29195263IPR003657WRKY domain
SuperFamilySSF1182902.88E-25203263IPR003657WRKY domain
SMARTSM007741.5E-36204262IPR003657WRKY domain
PROSITE profilePS5081124.134206263IPR003657WRKY domain
PfamPF031062.8E-25206261IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.5E-32399471IPR003657WRKY domain
SuperFamilySSF1182902.48E-28405471IPR003657WRKY domain
PROSITE profilePS5081131.789406471IPR003657WRKY domain
SMARTSM007747.5E-37411470IPR003657WRKY domain
PfamPF031063.1E-25412468IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009957Biological Processepidermal cell fate specification
GO:0010214Biological Processseed coat development
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    Send to blast
MGAQMNSETK MEVNEAEKIA IARPVASRPR CPIYRSFSEL LAGAINTSST NVHCEMAITA  60
IKPKTVRLKP AANHALIGEL SSQVGMSGAP VDCRSDNVLQ SAEKLKVLYK PMAKLAPRKN  120
ISLLENKGSY APDQKREIAE DEAEGHVQSA SEVKQQNGLT TESRQSLLAK SRQDKRIMQS  180
AIVSENTEEV EQSLLNTNNI DRPSYDGYNW RKYGQKQVKG SEYPRSYYKC THLKCPVKKK  240
VERSHDGQIA EIVYRGEHNH PKPQPPKRNF SDGQGRALVS NDTSKETINP ALSNQYPQTS  300
EANVHRIENQ TDVGLSTHSA YSSKPPCFYD PTSNAGMYSA FRNSEDSAER DKKLEADCDE  360
PKTKRRSNLI SDYYVIQLPR KIEGQPNGAG TSGESALPHM SIQNTTDSEI TEDGFRWRKY  420
GQKVVKGNSY PRSYYRCTSP KCNVRKFVER SIDDPNALIT TYEGKHNHGI PSRRPNSEAS  480
KTSSKSSAMK DKS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-30206472178Probable WRKY transcription factor 4
2lex_A1e-30206472178Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKU6410090.0KU641009.1 Petunia x hybrida cultivar R27 WRKY transcription factor (PH3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016445312.10.0PREDICTED: WRKY transcription factor 44-like
RefseqXP_016445313.10.0PREDICTED: WRKY transcription factor 44-like
TrEMBLA0A142I5D80.0A0A142I5D8_PETHY; WRKY transcription factor
STRINGXP_009600193.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA99512227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.12e-83WRKY family protein