PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00434g11030.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family HSF
Protein Properties Length: 433aa    MW: 49444.8 Da    PI: 6.1075
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00434g11030.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind111.75.2e-35141042101
                               HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXX CS
              HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksF 86 
                               Fl k+ye+++d+ ++ ++sws+ng+sfvv+++ efa+++LpkyFkh+nf+SF+RQLn+YgF+kv+ e+         weF++++F
  Peinf101Scf00434g11030.1  14 FLVKTYELVDDPYTNPIVSWSQNGRSFVVWNPPEFARDLLPKYFKHNNFSSFIRQLNTYGFRKVDPEQ---------WEFANEEF 89 
                               9***************************************************************9998.........******** PP

                               XXXXXXXXXXXXXXX CS
              HSF_DNA-bind  87 kkgkkellekikrkk 101
                                +g+++ll++i r+k
  Peinf101Scf00434g11030.1  90 IRGQRHLLKNIYRRK 104
                               *************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.101.2E-38698IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467852.18E-3510103IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004151.8E-6210103IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.3E-201437IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004475.0E-3114103IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.3E-205264IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS0043405377IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.3E-206577IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MDNSNGGSSA PAPFLVKTYE LVDDPYTNPI VSWSQNGRSF VVWNPPEFAR DLLPKYFKHN  60
NFSSFIRQLN TYGFRKVDPE QWEFANEEFI RGQRHLLKNI YRRKPIHSHS AATGQSAAPL  120
TDSERQEYEE EIERLKRENS LLQSSAEKQE KFNQQYEFEV KSMMEQRLHN IVQRQGKLIS  180
LLAQLLQRPD FSSDLIQYSN NNTKKRRLLV SNYLEQEHAT NSIVAPKLDL EIVKKLDSSI  240
NFWERFLHGI QKTQNEEIYS FDVHKQPLPS PVVIREMDTS SDDSGKRNSP TNHSSSPSRD  300
IESSLELGGP LSPAISSIYI NLECQLKPSD QNSANSNIAS TFGADDLIKD QVEANNDASK  360
SVSSLGNDGF WQQFFTETPG STEPNGVNML SKDVNGLTCD SRLAENQRHW WNREFNVDNL  420
TKHMGHLRPA TGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B2e-25610322129Heat shock factor protein 1
5d5v_B2e-25610322129Heat shock factor protein 1
5d5v_D2e-25610322129Heat shock factor protein 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009769104.10.0PREDICTED: heat stress transcription factor A-4b-like
RefseqXP_016493667.10.0PREDICTED: heat stress transcription factor A-4b-like
TrEMBLA0A1S4BXN70.0A0A1S4BXN7_TOBAC; heat stress transcription factor A-4b-like
TrEMBLA0A1U7W3A40.0A0A1U7W3A4_NICSY; heat stress transcription factor A-4b-like
STRINGXP_009769104.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA84352329
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18880.12e-71heat shock transcription factor A4A