PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00381g12003.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 461aa    MW: 52257.1 Da    PI: 8.2843
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00381g12003.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.61.1e-0581100221
                               EETTTTEEESSHHHHHHHHH CS
                   zf-C2H2   2 kCpdCgksFsrksnLkrHir 21 
                               +C+ CgksF+++ +L  H++
  Peinf101Scf00381g12003.1  81 VCKECGKSFPSWKSLFGHMK 100
                               6******************7 PP
2zf-C2H213.60.0002373395123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               y+Cp+C +sF++   L  H r+H
  Peinf101Scf00381g12003.1 373 YECPICFRSFPSGQALGGHKRSH 395
                               99******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.121032IPR015880Zinc finger, C2H2-like
SuperFamilySSF576674.68E-91032No hitNo description
PROSITE profilePS501579.2451032IPR007087Zinc finger, C2H2
PfamPF139123.4E-71033IPR007087Zinc finger, C2H2
PROSITE patternPS0002801232IPR007087Zinc finger, C2H2
SuperFamilySSF576674.68E-975102No hitNo description
SMARTSM003550.00380102IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.13880107IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.608.0E-481103IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE patternPS00028082102IPR007087Zinc finger, C2H2
PfamPF139123.0E-882103IPR007087Zinc finger, C2H2
SMARTSM003550.14296318IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.18296323IPR007087Zinc finger, C2H2
SuperFamilySSF576675.53E-8296318No hitNo description
PfamPF139127.0E-11296319IPR007087Zinc finger, C2H2
PROSITE patternPS000280298318IPR007087Zinc finger, C2H2
SuperFamilySSF576675.53E-8368395No hitNo description
PfamPF139122.6E-12372396IPR007087Zinc finger, C2H2
SMARTSM003550.052373395IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.889373395IPR007087Zinc finger, C2H2
PROSITE patternPS000280375395IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    Send to blast
MEEDQELIKH VCKLCNKRFP CGRSLGGHMR SHLINDDKHT KKKILAAAYV LRENPKKNSR  60
LVSESSSELD TLLTTNQQNK VCKECGKSFP SWKSLFGHMK CHSTRISCVE EEEKDSWNNQ  120
SDSEAAAANY RKKRSSRKMK RYIAATLTSS TLTVDASSLI CLSEINEQQQ EEEVALSLIM  180
LSTDVGNLVG LNPNGTTECS DANSQFLQTR SSNKSSKCKE TELIKLKKVR NVKASFIPTE  240
HKFLGDDNEK ESTIMDNLYS TEIEIFSDQK EINSSKKRSI EKNDYIDSNK QKINKFECTT  300
CNKSFHSYQG LGGHKASHKR FKGSDENNSS IEIHVNLQNP VVASKNIVKN VSKDSTIIEF  360
GKENYISKKQ KVYECPICFR SFPSGQALGG HKRSHMIAEC KSNIDIEIHK PIIPEIRVLL  420
DLNMPAPVEE ESSTEHIEEF KSWWNVGNIH KHEQFVGLLS N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009623743.11e-142PREDICTED: zinc finger protein ZAT9-like
RefseqXP_016438592.11e-142PREDICTED: zinc finger protein ZAT9-like
TrEMBLA0A1S3XFD41e-141A0A1S3XFD4_TOBAC; zinc finger protein ZAT9-like
STRINGXP_009623743.11e-141(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44812241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.12e-28C2H2-like zinc finger protein