PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00303g14010.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family GeBP
Protein Properties Length: 319aa    MW: 36412.6 Da    PI: 8.5771
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00303g14010.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57371.91.2e-2259149297
                    DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdq 86 
                                f++++s+eDei++L G i+fk++ g +p +++ +fy f+ +s+sf +++ ql+eK+rr+ +K+ k+++    g  ++ +++h+ 
  Peinf101Scf00303g14010.1  59 SFSKIFSDEDEITILEGAIKFKKESGLDPRKNLVKFYAFIIESLSFPATRIQLSEKVRRFNEKYVKHMHC---G--TTPKTPHEL 138
                               699*****************************************************************99...4..45678999* PP

                    DUF573  87 kifelskkiWg 97 
                                 f+l++kiW 
  Peinf101Scf00303g14010.1 139 TLFNLCHKIWV 149
                               **********6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.4E-2060148IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MSEDGSGSGS GAQKLPNAQV RKIDSEKNLG NRILYNETPS DEESKTEKVQ AKQSGKSKSF  60
SKIFSDEDEI TILEGAIKFK KESGLDPRKN LVKFYAFIIE SLSFPATRIQ LSEKVRRFNE  120
KYVKHMHCGT TPKTPHELTL FNLCHKIWVQ VSEPHNIGEQ HELSGQSEHR NMSKMAQLKQ  180
PNIIPKPIKP ENGMDLKALF DLGKRLVEDI QLILNVMTRS HDNSKQVSLK QCDLYAQSLR  240
LLAKFESFVA EKAKSPEMHH SSELLEQEVL RAYFEVKLEH TQLISNAYTA FIKIFKNLAH  300
EEERIFGSDK VGCYVIYLS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA138051214
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01370.11e-09DNA-binding storekeeper protein-related transcriptional regulator