PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00269g05002.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

C2H2

Protein Properties

Length: 362aa MW: 40215.7 Da PI: 7.4195

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00269g05002.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00086	153	175	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H Peinf101Scf00269g05002.1 153 YECKTCNRTFPSFQALGGHRASH 175 99**********99999998887 PP
2	zf-C2H2	13	0.00032	242	264	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++Cg F++ L H+r+H Peinf101Scf00269g05002.1 242 HACSYCGAEFNSGQALGGHMRRH 264 67********************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13912	3.4E-13	152	177	IPR007087	Zinc finger, C2H2
SuperFamily	SSF57667	3.26E-8	152	175	No hit	No description
SMART	SM00355	0.052	153	175	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	11.843	153	180	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	155	175	IPR007087	Zinc finger, C2H2
SuperFamily	SSF57667	3.26E-8	237	264	No hit	No description
PROSITE profile	PS50157	10.18	242	269	IPR007087	Zinc finger, C2H2
Pfam	PF13912	9.3E-12	242	266	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.021	242	264	IPR015880	Zinc finger, C2H2-like
PROSITE pattern	PS00028	0	244	264	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence Send to blast
MEAPHEEVVR GSNNELSHIV KGKRTKRLRP QSPIPFTITS HSSTRGDSHD QDGVVLHGEV 60 TIIDNNNNSS PPPATSAENF PDIPTEEEEE TAKCLILLSQ GSYHRRFMES SPDKLFNLFN 120 DDMGLSQSKF NSKKYVETTN VGNGGGKVGT YVYECKTCNR TFPSFQALGG HRASHKKPKP 180 LTLEPKKPFF YFSDQDEPSP TTTYKNNNNN VNNKLSPLSP LSFQFNNINM ESPTNKSSPR 240 IHACSYCGAE FNSGQALGGH MRRHRGGANT NLCLSPLSTP AISIEDSSYN NLKKPRNVGL 300 SLDLNLPAPE DQSHSRNLQH PPKFPVLALE QQDDQGEKQK QHEEQSTALV LSTTPKLIDC 360 HY

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence Send to blast

MEAPHEEVVR GSNNELSHIV KGKRTKRLRP QSPIPFTITS HSSTRGDSHD QDGVVLHGEV  60
TIIDNNNNSS PPPATSAENF PDIPTEEEEE TAKCLILLSQ GSYHRRFMES SPDKLFNLFN  120
DDMGLSQSKF NSKKYVETTN VGNGGGKVGT YVYECKTCNR TFPSFQALGG HRASHKKPKP  180
LTLEPKKPFF YFSDQDEPSP TTTYKNNNNN VNNKLSPLSP LSFQFNNINM ESPTNKSSPR  240
IHACSYCGAE FNSGQALGGH MRRHRGGANT NLCLSPLSTP AISIEDSSYN NLKKPRNVGL  300
SLDLNLPAPE DQSHSRNLQH PPKFPVLALE QQDDQGEKQK QHEEQSTALV LSTTPKLIDC  360
HY

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00487	DAP	Transfer from AT5G04390	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009609087.1	1e-177	PREDICTED: zinc finger protein ZAT5
TrEMBL	A0A1S3ZY08	1e-175	A0A1S3ZY08_TOBAC; zinc finger protein ZAT5-like
STRING	XP_009609087.1	1e-176	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4015	23	43

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10470.1	1e-40	C2H2 family protein