PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00269g04018.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 581aa    MW: 65500.3 Da    PI: 4.5957
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00269g04018.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.85.2e-5071511128
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...................kvkaeekewyfFskrdk 66 
                               l+pGfrFhPtdeelv +yL++k+ gk+l++ ++i+e+diykvePwdLp                    ++k+++ ewyfF+  dk
  Peinf101Scf00269g04018.1   7 LAPGFRFHPTDEELVRYYLRRKIIGKPLRF-DAISEIDIYKVEPWDLPGitpflqeplaqhyrclglsRLKTRDLEWYFFTMLDK 90 
                               579*************************99.99***************55899*******999999887888889********** PP

                       NAM  67 kyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               k+ +g ++nrat++gyWk+tgkd++v++ k+++vg+kktLv+++grapkg++++Wvmhey+l
  Peinf101Scf00269g04018.1  91 KHGNGAKTNRATDRGYWKTTGKDRAVHH-KSKVVGMKKTLVYHSGRAPKGQRSNWVMHEYKL 151
                               ****************************.999****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.23E-566174IPR003441NAC domain
PROSITE profilePS5100554.9397174IPR003441NAC domain
PfamPF023652.9E-279151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 581 aa     Download sequence    Send to blast
MESRKSLAPG FRFHPTDEEL VRYYLRRKII GKPLRFDAIS EIDIYKVEPW DLPGITPFLQ  60
EPLAQHYRCL GLSRLKTRDL EWYFFTMLDK KHGNGAKTNR ATDRGYWKTT GKDRAVHHKS  120
KVVGMKKTLV YHSGRAPKGQ RSNWVMHEYK LIDEELDKAG ISQDAFVLCR VFQKSGAGPK  180
NGEKYGAPFV EEEWEDDELE FVPKGGQSKE EIVPKEEAAE EVEFGDDIYL DGHDLEQILV  240
TDTPVDGAPL PLNRYYEENA SNSEETGNSF EDVQNWIQQP EEQEEQEPFD PAIQQNANAN  300
PVKHEFMSEP SKSLNSEDVD YLLNEPIVTA TDNQQFDDGA FLEASDLSRP ITVDTSGFDM  360
LEEYLTYFDA TDDFQNMGFD PPMMIGGDDH VSDLASLNEK NTTEVADQPI TLCEKLPDDV  420
ASSSKMEPSK FGSDYQYPFM KKGSCMLSSI PAPPAFASEF PSKDLRLNSS SGASSSIHVT  480
AGFIQIRNMT VSGNGSDGLV GKHGNYNIIL SFGLPQHGDS FASMESVVSI LPGKTISTAS  540
WCWFYYLFFW VLILSMSFKI GTLVRATFGR IVQETTKKYK K
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A4e-42618019174NAC domain-containing protein 19
3swm_B4e-42618019174NAC domain-containing protein 19
3swm_C4e-42618019174NAC domain-containing protein 19
3swm_D4e-42618019174NAC domain-containing protein 19
3swp_A4e-42618019174NAC domain-containing protein 19
3swp_B4e-42618019174NAC domain-containing protein 19
3swp_C4e-42618019174NAC domain-containing protein 19
3swp_D4e-42618019174NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009625486.10.0PREDICTED: NAC domain-containing protein 78-like
RefseqXP_009764398.10.0PREDICTED: NAC domain-containing protein 78-like
RefseqXP_016467787.10.0PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A1S3ZTU30.0A0A1S3ZTU3_TOBAC; NAC domain-containing protein 78-like
TrEMBLA0A1U7VDG20.0A0A1U7VDG2_NICSY; NAC domain-containing protein 78-like
STRINGXP_009764398.10.0(Nicotiana sylvestris)
STRINGXP_009625486.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31412450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.11e-122NAC domain containing protein 53