PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00244g18024.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family GRAS
Protein Properties Length: 900aa    MW: 101441 Da    PI: 6.6889
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00244g18024.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS245.12.8e-75974554367
                      GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal..ppsetseknsseelaalkl.fs 85 
                               lL + Ae++ +++  la+++L    + as +g+p+qR++ yf+eAL++r+a+  +++++    + ++ +e++ ++ l++ k+   
  Peinf101Scf00244g18024.1  97 LLQASAEMFVQKQYDLARKFLILCDHSASDTGNPLQRIVYYFAEALRSRIAK-ETGVSQEGgsRKKAVHEEKPIQLLKSAKIaCR 180
                               5677899********************************************9.67777766224444455557888888888899 PP

                      GRAS  86 evsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfA 169
                               + +P+  + ++   qaIl+ + +e+rvHiiD++ + Gl  p +++aLa+R+e p   l++T+vg     s++++e+tg+rL++fA
  Peinf101Scf00244g18024.1 181 QDTPFSHIIQFPGIQAILDNIVSERRVHIIDLGREFGLPVPIIMHALANRNECPLeLLKVTAVGT----SRKRIEQTGKRLSSFA 261
                               ***************************************************7665499*******....9*************** PP

                      GRAS 170 eelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFl 254
                               e++++pf fn+ v  +++dl+ e++++++gE++aV +  ++ +ll+++  le     ++k++ksl+P ++vv+e ea+++++ F 
  Peinf101Scf00244g18024.1 262 ETMNIPFLFNI-VDLEIKDLKKENFELDEGEVVAVYSESRMCTLLAQPNYLEG----LIKVIKSLKPSIMVVSEIEASTDTPIFI 341
                               **********9.688******************************99999998....**************************** PP

                      GRAS 255 erflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqakl 339
                               +rf   l++y a+fd+l + + +++++r+  E  ++++ i+nv+  eg+er +rh +   Wre + + G  + ++s++   qa+l
  Peinf101Scf00244g18024.1 342 DRFNALLSFYGAFFDCLGTCMKPDDQNRSIAEGIYFREVIRNVIISEGKERLHRHSKITFWREFFARYGIVETEFSNSSLYQASL 426
                               ************************************************************************************* PP

                      GRAS 340 llrkvk.sdgyrveeesgslvlgWkdrpL 367
                               l+++ + +   +++ + ++l+l Wk+ p+
  Peinf101Scf00244g18024.1 427 LIKRSAcWSSCSLDFDGKCLILNWKGTPM 455
                               ******9999***************9987 PP
2GRAS240.38.1e-745338964374
                      GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalklfsev 87 
                               lL + A+++ +++  +a+ +L+   + as  g+p+qR++ yf+eAL++r+  ++  +++  + ++ + ++      +a  +  + 
  Peinf101Scf00244g18024.1 533 LLQASAKMFVQKQYYRARMFLSFCDQSASDIGNPLQRVVYYFAEALRKRIDMETGVISEGGSRKAVDVEKpLMLLRSAILACRQE 617
                               5667799999*****************************************8555556555555555444333333333448999 PP

                      GRAS  88 sPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAee 171
                                P+  +  ++  q++l+ + ++++vHiiDf+ +  l  p +++aLa+R++ p   l+iT+vg     s++++ee g+r+++fAe+
  Peinf101Scf00244g18024.1 618 IPFSHIIEFAGIQTVLDNTVSARKVHIIDFGRETALPMPIIMHALANRNDCPLeLLKITAVGT----SRQRIEENGKRISSFAET 698
                               9************************************************655449********....9***************** PP

                      GRAS 172 lgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFler 256
                               +++pf fn+ v ++++dl+ e++++++gE++aV + ++l ++ + + +le     +++++ksl+P v+vv+e ea++n++ F +r
  Peinf101Scf00244g18024.1 699 MDIPFLFNI-VDSEMKDLKKENFELDEGEVVAVYSEFRLCTMSAWPDHLEG----FVRVIKSLKPSVMVVSETEASTNTPIFIDR 778
                               ********9.799*****************************977777777....****************************** PP

                      GRAS 257 flealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklll 341
                               f   l+ +sa fd++ + + ++++ r+ +E   + ++i+nv+  eg+er++rh + + Wr+ + + G  + +ls++   qa+ll+
  Peinf101Scf00244g18024.1 779 FNALLSLVSAYFDCYGTCMKPDDQSRAILEGY-FYEAIKNVIISEGEERFHRHSKISFWRNLFARYGIVETELSTSSLYQASLLI 862
                               *****************************998.**************************************************** PP

                      GRAS 342 rkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                               ++++ +   +++ + ++l+l Wk+ p+ s+SaW+
  Peinf101Scf00244g18024.1 863 QRHAhWSSCSLDFDGKCLILKWKGTPVRSLSAWK 896
                               ****8888*************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098536.5568441IPR005202Transcription factor GRAS
PfamPF035149.7E-7397455IPR005202Transcription factor GRAS
PROSITE profilePS5098533.436504875IPR005202Transcription factor GRAS
PfamPF035142.8E-71533896IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 900 aa     Download sequence    Send to blast
MDSFHHPTLA LLELLSRLNS NMRRLAGDRQ HESLSATPWS SSSSGLPSTD ELMNIARARL  60
SQITSISSLF YSFILDPSIA CSGLPPEIAA DVELSLLLQA SAEMFVQKQY DLARKFLILC  120
DHSASDTGNP LQRIVYYFAE ALRSRIAKET GVSQEGGSRK KAVHEEKPIQ LLKSAKIACR  180
QDTPFSHIIQ FPGIQAILDN IVSERRVHII DLGREFGLPV PIIMHALANR NECPLELLKV  240
TAVGTSRKRI EQTGKRLSSF AETMNIPFLF NIVDLEIKDL KKENFELDEG EVVAVYSESR  300
MCTLLAQPNY LEGLIKVIKS LKPSIMVVSE IEASTDTPIF IDRFNALLSF YGAFFDCLGT  360
CMKPDDQNRS IAEGIYFREV IRNVIISEGK ERLHRHSKIT FWREFFARYG IVETEFSNSS  420
LYQASLLIKR SACWSSCSLD FDGKCLILNW KGTPMSNTRR LTGEEQNGKL SAIPRSSSSS  480
KLPSTDELMN IARARLSQIT SISSFVYSLI LDPSISCSGL PPDIAEDVEL SLLLQASAKM  540
FVQKQYYRAR MFLSFCDQSA SDIGNPLQRV VYYFAEALRK RIDMETGVIS EGGSRKAVDV  600
EKPLMLLRSA ILACRQEIPF SHIIEFAGIQ TVLDNTVSAR KVHIIDFGRE TALPMPIIMH  660
ALANRNDCPL ELLKITAVGT SRQRIEENGK RISSFAETMD IPFLFNIVDS EMKDLKKENF  720
ELDEGEVVAV YSEFRLCTMS AWPDHLEGFV RVIKSLKPSV MVVSETEAST NTPIFIDRFN  780
ALLSLVSAYF DCYGTCMKPD DQSRAILEGY FYEAIKNVII SEGEERFHRH SKISFWRNLF  840
ARYGIVETEL STSSLYQASL LIQRHAHWSS CSLDFDGKCL ILKWKGTPVR SLSAWKFLDD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A8e-3012389632375GRAS family transcription factor containing protein, expressed
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019174204.11e-137PREDICTED: scarecrow-like protein 23
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2511922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.11e-43RGA-like 2