PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00146g02006.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 787aa    MW: 90823.8 Da    PI: 9.7767
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00146g02006.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.11.2e-116761899
                              --HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                        B3 18 lpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                              +p  f+ ++ +g ++e     +  +  ++W vkl  ++++    l++GW++F+++++L  gD++vF+++g++ef   v++f++
  Peinf101Scf00146g02006.1  6 IPTGFL-KYlKGHEHE---RAILRRGYKKWLVKL--NGQQ----LEEGWEKFANEHDLHLGDILVFRHEGDMEF--DVSIFDS 76
                              677777.443444333...33445677*******..7777....************************999999..9999986 PP
2B353.83.6e-17135215690
                               ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                        B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                               ++++ l++g l+lpk+fa ++g+ + ++  l+l+de  rsW++kl  + ++   ++++GW++F  +n Lk gD ++F+ +  s++
  Peinf101Scf00146g02006.1 135 VREYCLSRGHLYLPKQFAIANGLTN-KKCNLILKDEGQRSWNLKL--SYCKTVAYIGDGWSKFLVDNCLKKGDRIMFEIVT-SGE 215
                               6789999**************8875.4459***************..66666799***********************765.444 PP
3B334.14.8e-114124792699
                               T..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                        B3  26 h..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                               +  g++++e+  l+    + ++W vkl  ++ +    +++GWkeF+++++L+  D++vF+++g+++f   v++f++
  Peinf101Scf00146g02006.1 412 YleGYDQHEHAALRRAGNKEKVWPVKL--NGWR----FEEGWKEFAEEHDLQLEDVLVFRHEGDMKF--DVSIFDS 479
                               44555555666677777888*******..6665....99**********************999999..9999986 PP
4B353.25.3e-17540625590
                               -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS
                        B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 
                                ++++ l+s+ l lpkkfa+++g+++ ++  l+++de+ rsW+++l+ + ks+r+ +++GW +Fv    Lk gD v+F+++ + +
  Peinf101Scf00146g02006.1 540 IIQPYCLSSNYLHLPKKFATANGLINVKKCPLIIRDERHRSWDLTLS-SSKSSRVCIGGGWPKFVAGVCLKKGDCVIFEVVTNgK 623
                               678999****************888888888***************6.55555799***********************886534 PP

                               EE CS
                        B3  89 ef 90 
                               + 
  Peinf101Scf00146g02006.1 624 TP 625
                               44 PP
5B340.54.7e-136286971999
                               -HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                        B3  19 pkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                               p  f+ ++ ++  ++ +  +  + g++W vkl  ++++    +++GW++Fv++n+L+ g ++vFk++g++ef   v++f++
  Peinf101Scf00146g02006.1 628 PIGFL-KYLKV--RENEHAVLRRAGKKWLVKL--NGHR----FREGWEKFVEENDLELGNILVFKHEGDMEF--EVTIFDS 697
                               55555.44333..3346677889*********..7777....9***********************999999..9999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086311.956177IPR003340B3 DNA binding domain
SMARTSM010197.6E-5377IPR003340B3 DNA binding domain
SuperFamilySSF1019364.71E-14579IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.109.5E-16579IPR015300DNA-binding pseudobarrel domain
PfamPF023622.3E-8676IPR003340B3 DNA binding domain
CDDcd100171.69E-10675No hitNo description
SMARTSM010195.9E-17130224IPR003340B3 DNA binding domain
PROSITE profilePS5086312.464130224IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.105.4E-18130221IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019365.89E-17131221IPR015300DNA-binding pseudobarrel domain
PfamPF023625.8E-15135217IPR003340B3 DNA binding domain
CDDcd100172.10E-15138209No hitNo description
SuperFamilySSF1019364.12E-7237274IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.4E-6237274IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508637.866245282IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.105.3E-4336383IPR015300DNA-binding pseudobarrel domain
SMARTSM010191.7E-9339480IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.8E-13418480IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086310.377424480IPR003340B3 DNA binding domain
SuperFamilySSF1019364.51E-12431480IPR015300DNA-binding pseudobarrel domain
CDDcd100171.06E-10432478No hitNo description
Gene3DG3DSA:2.40.330.103.5E-16530623IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.55E-16533624IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508639.968536617IPR003340B3 DNA binding domain
SMARTSM010199.3E-10537627IPR003340B3 DNA binding domain
PfamPF023627.0E-14540626IPR003340B3 DNA binding domain
CDDcd100171.18E-10540617No hitNo description
SuperFamilySSF1019366.87E-16626700IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.0E-16626700IPR015300DNA-binding pseudobarrel domain
PfamPF023625.1E-10627697IPR003340B3 DNA binding domain
CDDcd100176.54E-12627696No hitNo description
PROSITE profilePS5086312.111627698IPR003340B3 DNA binding domain
SMARTSM010196.4E-6631698IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 787 aa     Download sequence    Send to blast
MVLQKIPTGF LKYLKGHEHE RAILRRGYKK WLVKLNGQQL EEGWEKFANE HDLHLGDILV  60
FRHEGDMEFD VSIFDSSQCN RKYEAHTVEE TFKNFEFKEK RRPKDIKSSK KDSFHAKAAT  120
NHRKPLGQSR CVCTVREYCL SRGHLYLPKQ FAIANGLTNK KCNLILKDEG QRSWNLKLSY  180
CKTVAYIGDG WSKFLVDNCL KKGDRIMFEI VTSGETPIWK FQVVANGETP MSKFQGRVSG  240
RHFGIRRGWS KFRAANGLQV GDAYKFELIK NGKIPEAYFH HLRGSPSLQP EGKKKDFDAK  300
RISNKSLDSQ EKSESNIKTS GKVFPNVEAS KDMHLSHPHF ICTIQPYSIS RHYLHVPRQF  360
ALETCLNNRK CEIIVRDERR SWTYLRGPSL KPEVKKKNLD SERITDKGYL KYLEGYDQHE  420
HAALRRAGNK EKVWPVKLNG WRFEEGWKEF AEEHDLQLED VLVFRHEGDM KFDVSIFDSN  480
THCNRKYPEN QQQEAAHITV EETSKSVKLK EKLSRRSIKS SKRGSSQAEA ATDHSHFEFI  540
IQPYCLSSNY LHLPKKFATA NGLINVKKCP LIIRDERHRS WDLTLSSSKS SRVCIGGGWP  600
KFVAGVCLKK GDCVIFEVVT NGKTPKLPIG FLKYLKVREN EHAVLRRAGK KWLVKLNGHR  660
FREGWEKFVE ENDLELGNIL VFKHEGDMEF EVTIFDSSHC ERECELPQQG VDEREQEKDL  720
RGNAPLQHGG KKTNLDVQRF STRGLDQSLG AVFGMKKGKY AGKDAPGIRE ALNKLMEQLM  780
MDNGKDP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32215171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26680.12e-32B3 family protein