PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00125g04028.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 573aa    MW: 59625.7 Da    PI: 6.962
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00125g04028.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.31.5e-07173217144
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 
                               r++W+t Ed  l+ av++ G g+W+ I +       Rt+ q+  rw
  Peinf101Scf00125g04028.1 173 RKPWSTAEDMELIAAVQKCGEGNWANIVKgdFK-GDRTPSQLSQRW 217
                               789**********************99652133.477777777777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.402168225IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.9E-12169221IPR009057Homeodomain-like
SuperFamilySSF466895.02E-12170223IPR009057Homeodomain-like
SMARTSM007179.6E-9172223IPR001005SANT/Myb domain
PfamPF002496.0E-6173217IPR001005SANT/Myb domain
CDDcd116608.54E-14174222No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 573 aa     Download sequence    Send to blast
TTVLGVLQEV AGQVVTDVKI DWNALVKKTT TGITNAREYQ MLWRHLAYRH GLLDGFDDGA  60
QPLDDDSDLE YELEASPAVS NEASAEAAAC VKVLIASGAS SDANMVNGST VEAPLTINVP  120
NGQTSGTGPE NSSHGTSMHG TNITVPVAVP TMAAEGLDTH GPATTTLPAR RKRKPWSTAE  180
DMELIAAVQK CGEGNWANIV KGDFKGDRTP SQLSQRWAII RKRKGTMVGN GSQLSEAQLA  240
ARRAMSLALN MPMGDKLKAA CPIGAGVGSN AGGGPSNSSH SVTADLASGG AKSQHQQDPI  300
SSKPWVAPKR PSPKPTTSPD SMVKAAAVAA GARIATPSGA VSLLKAAQSK PALRNVPGGG  360
PAVKPPILGN TNGLPSNVHF IRTGLVSRST GPSNASRPGT QKVLGHPLKP ASPAVQLKSV  420
DTPSRSNASA EPDDPTCPQV AELEVNKQEL LHKNQAVALS NVQKDKPVGD LDASGDNALP  480
PQVQQHRPTA AGNPLIEKVK DQTSVLDDVP KEHTQEDQDS VNANAPSVQV QKKLIDLPSQ  540
EIASNYTNDA SIAPARTEES AEEGDPNKAP ARI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009597578.10.0PREDICTED: uncharacterized protein LOC104093530
TrEMBLA0A1S4C6830.0A0A1S4C683_TOBAC; uncharacterized protein LOC107815624
STRINGXP_009597578.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34342237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.12e-66MYB_related family protein