PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00096g00026.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 521aa    MW: 59367.4 Da    PI: 9.2518
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00096g00026.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.72.3e-06121144123
                               EEETTTTEEESSHHHHHHHHHH.T CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                               y+C+ Cg++F ++ +L++H++  H
  Peinf101Scf00096g00026.1 121 YPCTLCGEVFQNPTHLEQHQSIkH 144
                               99******************9888 PP
2zf-C2H219.62.4e-06284307123
                               EEETTTTEEESSHHHHHHHHHH.T CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                               y+C+ Cg++F ++ +L++H++  H
  Peinf101Scf00096g00026.1 284 YPCTLCGEVFQNPAHLEQHQSIkH 307
                               99******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.783121149IPR007087Zinc finger, C2H2
SMARTSM003550.0019121144IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280123144IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.679284312IPR007087Zinc finger, C2H2
SMARTSM003550.0019284307IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280286307IPR007087Zinc finger, C2H2
SuperFamilySSF563995.66E-12319520No hitNo description
Gene3DG3DSA:3.90.228.109.0E-5323425IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene3DG3DSA:3.90.228.105.9E-5456520IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    Send to blast
MATIFRPFFS TFLSIFILLL HLGCFIFSSN NSHHHKRPSK KRKLSISNSW TFLKRIFSSK  60
PNQIPHPTTP LHHNPSIPSP CSSTRSLHKP IVPISPDNPI TRPEYGIRSD HFFFPLRNDI  120
YPCTLCGEVF QNPTHLEQHQ SIKHAVSELL DVDSGKNIVR IIFNTGWPEK MNKNPVIHRV  180
LKIHSSCFIF SSNNSHHHKQ PSKKRKLSIS NSWTFLKRIF SSKPNQIPHP TTPLHHNPSI  240
PSPCSSTRSL HKPIVPISPD NPITRPEYGI CSDHFFFPLR NDIYPCTLCG EVFQNPAHLE  300
QHQSIKHAVS ELLDVDSGKN IVRIIFNTGW PEKMNKNPVI HRVLKIHSSK KILTRFEEYR  360
EYVKLKASKN VAVKRDGRCI ADGNELLRFH CTTFICELGQ NGNSSICNQQ YCSVCGIIKS  420
GFSQKMDGIS MQPTSFRAHV AVPEEIEEEF GFMHVKRAML VCRVIAGRVG CDPDLADKED  480
PGFDSLVGRE NGVHMRLDEE DELLVFNSRA VLPCFVIVYT V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009773098.10.0PREDICTED: uncharacterized protein LOC104223368
RefseqXP_016491454.10.0PREDICTED: uncharacterized protein LOC107811098
TrEMBLA0A1S4BRD70.0A0A1S4BRD7_TOBAC; uncharacterized protein LOC107811098
TrEMBLA0A1U7W3C20.0A0A1U7W3C2_NICSY; uncharacterized protein LOC104223368
STRINGXP_009773098.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA118341821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.11e-101C2H2 family protein