PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Ctg13487226g00004.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Protein Properties

Length: 142aa MW: 16620.4 Da PI: 10.4687

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Ctg13487226g00004.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	39.2	1.3e-12	40	119	9	90
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 ++ ++++l++p + +++++++ + ++t++d+ gr++e kl+++k + r++lt+GW + ++ n ++ +D ++ ++++ + Peinf101Ctg13487226g00004.1 40 HAKRRDMLYIPADVLKDYNIE--LPSKMTIRDSAGREFEAKLKIWKDG-RIWLTGGWGRLCRWNLVEKKDRCICEFVRGkGK 118 667899**********866..6779***********999996.89********************998865344 PP E CS B3 90 f 90 + Peinf101Ctg13487226g00004.1 119 R 119 4 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.40.330.10	3.6E-17	28	128	IPR015300	DNA-binding pseudobarrel domain
SuperFamily	SSF101936	1.08E-17	28	116	IPR015300	DNA-binding pseudobarrel domain
PROSITE profile	PS50863	9.968	32	131	IPR003340	B3 DNA binding domain
CDD	cd10017	2.62E-10	33	118	No hit	No description
SMART	SM01019	0.0015	35	131	IPR003340	B3 DNA binding domain
Pfam	PF02362	7.2E-11	40	122	IPR003340	B3 DNA binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence Send to blast
KCGRAKETKK REFVDYYGAD IFKSGLATQP KNPYFVARVH AKRRDMLYIP ADVLKDYNIE 60 LPSKMTIRDS AGREFEAKLK IWKDGRIWLT GGWGRLCRWN LVEKKDRCIC EFVRGKGKRG 120 LYLQVQVLHE EQLPTAARKN NK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016539681.1	5e-67	PREDICTED: B3 domain-containing protein At5g60140-like
TrEMBL	A0A1U8DZU9	1e-65	A0A1U8DZU9_CAPAN; Uncharacterized protein
TrEMBL	A0A2G2Y3W4	1e-65	A0A2G2Y3W4_CAPAN; B3 domain-containing protein At5g60140-like
TrEMBL	A0A2G3BVS0	1e-65	A0A2G3BVS0_CAPCH; Uncharacterized protein
STRING	PGSC0003DMT400066470	2e-62	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1091	22	64

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60140.1	2e-15	B3 family protein