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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Ctg13247756g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
M-type_MADS |
Protein Properties |
Length: 212aa MW: 24090 Da PI: 4.4938 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Ctg13247756g00001.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 24.5 | 3.5e-08 | 1 | 19 | 23 | 41 |
HHHHHHHHHT-EEEEEEE- CS
SRF-TF 23 KAeELSvLCdaevaviifs 41
KA+ELS+LCd++va++if
Peinf101Ctg13247756g00001.1 1 KAQELSTLCDVKVAIVIFK 19
9****************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 212 aa
Download sequence Send
to blast |
KAQELSTLCD VKVAIVIFKN GENTPILWPS QAVAEEIART FRNTDEFQKM KKLVKLENYL 60 LEKLQDRAEN IRKKNEEMEM EVLFNHLVVG KNINELDVRQ LKGLKKLFEV KRAKVAERKK 120 QLNEEKQLNE DNEKNEDVQP IQDQPDQPQP PPAADKNVSE ASTSSLELLK NNQLFLEAMA 180 ANQDFGLGVE SGTSSGPQEA VKDNDAEEEN DD
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FJ168509 | 0.0 | FJ168509.1 Petunia x hybrida type I MADS box transcription factor (MADSy4) gene, complete cds. |