PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PH01004940G0100 | ||||||||
Common Name | WRKY10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family | WRKY | ||||||||
Protein Properties | Length: 192aa MW: 20827 Da PI: 6.1112 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.2 | 1.9e-29 | 95 | 153 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K vk+s++pr+YYrC+++gC vkk+ver+ +dp +v++tY g Hnh PH01004940G0100 95 LDDGFKWRKYGKKAVKNSPNPRNYYRCSTEGCGVKKRVERDGDDPCYVITTYDGVHNHA 153 59********************************************************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.9E-31 | 84 | 155 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.57E-27 | 87 | 155 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.618 | 90 | 155 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.4E-34 | 95 | 154 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.7E-23 | 96 | 152 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
MAASLGLNPE AFFSSCPYSS PFLADYAPKF PAVAADFSAE LDDHRPSEYS PAPVFAGAGD 60 DHNDNDKTMS CESEEKRARV IGRIGFRTRS EVEILDDGFK WRKYGKKAVK NSPNPRNYYR 120 CSTEGCGVKK RVERDGDDPC YVITTYDGVH NHATPGFGAA AAAVLQYAGN YYNPPLSAGS 180 PPSAYSAGSL LF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 2e-27 | 82 | 155 | 4 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 2e-27 | 82 | 155 | 4 | 77 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PH01004940G0100 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | FP098478 | 0.0 | FP098478.1 Phyllostachys edulis cDNA clone: bphyem105p03, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006654120.1 | 6e-78 | PREDICTED: probable WRKY transcription factor 51 | ||||
TrEMBL | F4YCW4 | 1e-139 | F4YCW4_9POAL; Putative pathogenesis protein | ||||
STRING | OPUNC05G05190.1 | 5e-79 | (Oryza punctata) | ||||
STRING | LPERR05G04920.1 | 6e-79 | (Leersia perrieri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP441 | 37 | 206 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 2e-40 | WRKY DNA-binding protein 50 |