PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01004720G0080
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 125aa    MW: 13597.4 Da    PI: 10.1057
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01004720G0080genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.6e-113375547
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47
                     ++ rrk++NR++A+rsR RK+ +++eL+  v++L+  N  ++ 
  PH01004720G0080 33 RKRRRKESNRLSAQRSRTRKQRQLDELTAQVAALQDRNGVMAA 75
                     6789*********************************987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-102993IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.0023170IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.5E-83271No hitNo description
SuperFamilySSF579591.78E-83376No hitNo description
PfamPF001709.4E-93379IPR004827Basic-leucine zipper domain
CDDcd147029.26E-113485No hitNo description
PROSITE patternPS0003603651IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    Send to blast
MASPGVVSAV TTSSAGSEGA GEAQRAVAVM EERKRRRKES NRLSAQRSRT RKQRQLDELT  60
AQVAALQDRN GVMAAAAHDT ARRCAIVQAE NELLRARTLE LGARLQSLTD LIQCMEAAMY  120
SNYY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13236RKRRR
23238RKRRRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01004720G0080
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025818325.13e-44bZIP transcription factor 44-like
TrEMBLA0A1E5VQF22e-49A0A1E5VQF2_9POAL; Uncharacterized protein
STRINGSi003289m2e-42(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP137572428
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-16basic leucine-zipper 44