PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01004348G0070
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family EIL
Protein Properties Length: 540aa    MW: 59301.7 Da    PI: 6.0062
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01004348G0070genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3196.32.5e-60661911123
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa...tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsL 91 
                      eel+ rmw+d+m++krlke ++++ + +e+a      +++++s+eqa+rkkmsraQDgiLkYMlk+mevcnaqGfvYgiipekgkpv+gasd+L
  PH01004348G0070  66 EELEGRMWRDRMRHKRLKELQQSRGGGRESAaggDAVTRQRHSQEQAKRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVSGASDNL 159
                      8***************************9996543345688***************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3  92 raWWkekvefdrngpaaiskyqaknlilsges 123
                      raWWkekv+fdrngpaai+kyqa+n++l+ge 
  PH01004348G0070 160 RAWWKEKVRFDRNGPAAIAKYQADNAVLGGEG 191
                      ****************************9875 PP
2EIN3157.51.6e-48192394183354
                      HHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XXXXXXXXXX CS
             EIN3 183 elglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ssslrkqspk 273
                       +g++k+ g+ppykkphdlkk wkv+vLtavikhmsp++e++r+l+rqsk+lqdkm+a+e  ++l+vl+qee+++ ++++    ++ +  ++ +
  PH01004348G0070 192 DAGVPKELGPPPYKKPHDLKKTWKVAVLTAVIKHMSPDVEKVRRLVRQSKCLQDKMTAREIVTWLAVLKQEEELYLKLHPGacpPPPSVAGALS 285
                      579*****************************************************************************98754466778889 PP

                      XXXXXXXXXXXXXXXXXX.XXXXXXXXXX.........................XXXXXXXXXXXXX.XXXXXXXX.........XXXXXXX.X CS
             EIN3 274 vtlsceqkedvegkkeskikhvqavktta.........................gfpvvrkrkkkps.esakvssk...evsrtcqssqfrgse 338
                      +++s++ ++dv+g+++ + k+ ++ ++                           ++++++kr ++p+ e++ + ++   + ++tc++ q+++s+
  PH01004348G0070 286 FNASSG-EYDVDGEEAANLKAPSEATAFLdltmdaamsnkymimpavlmkveatNAEFTQKRSAPPAaEPELMLNNnnnNRVYTCDNVQCPHSD 378
                      998888.99*********8877765554499********************************9886155666544444678************ PP

                      XXXXXXXXXXXXXXXX CS
             EIN3 339 telifadknsisqney 354
                      ++l+f d+n+++ ++y
  PH01004348G0070 379 YALGFLDRNARNAHQY 394
                      **************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.3E-5566190No hitNo description
PfamPF048734.3E-28194263No hitNo description
Gene3DG3DSA:1.10.3180.106.6E-35194272IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.57E-27199266IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 540 aa     Download sequence    Send to blast
MMGGGVMTMD RRMAFAAEGN GEKGFMGFGG ECFVGEGDLV NPTRTQGQAH ENFPEDGSDD  60
DLDDIEELEG RMWRDRMRHK RLKELQQSRG GGRESAAGGD AVTRQRHSQE QAKRKKMSRA  120
QDGILKYMLK MMEVCNAQGF VYGIIPEKGK PVSGASDNLR AWWKEKVRFD RNGPAAIAKY  180
QADNAVLGGE GDAGVPKELG PPPYKKPHDL KKTWKVAVLT AVIKHMSPDV EKVRRLVRQS  240
KCLQDKMTAR EIVTWLAVLK QEEELYLKLH PGACPPPPSV AGALSFNASS GEYDVDGEEA  300
ANLKAPSEAT AFLDLTMDAA MSNKYMIMPA VLMKVEATNA EFTQKRSAPP AAEPELMLNN  360
NNNNRVYTCD NVQCPHSDYA LGFLDRNARN AHQYTCKYNN PAVQPSDAES KPPPVFPTSY  420
TPPSQALGSF DFSLPVDGQR CLAGLMNMYE TDAAAHRNLS TDTLLGPCLL GGVNNVQHQQ  480
SAAFFIRDDT PFGGDFTVAA PDHEYRFSSG FNVSEGGTVD YAGAMQQPPQ KYEGSNWFY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A8e-3219427155132Protein ETHYLENE INSENSITIVE 3
4zds_B8e-3219427155132Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512, PubMed:25995326). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Required for ethylene-promoted coleoptile elongation (PubMed:25995326). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:25995326}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01004348G0070
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding and metyhl jasmonate. {ECO:0000269|PubMed:19798512}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126151e-139CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015646574.10.0ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ8W3L90.0EIL2_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 2
TrEMBLA0A0E0LPX80.0A0A0E0LPX8_ORYPU; Uncharacterized protein
STRINGOPUNC07G25150.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.11e-104ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yilmaz A, et al.
    GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Plant Physiol., 2009. 149(1): p. 171-80
    [PMID:18987217]
  3. Yang C, et al.
    MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
    Plant Physiol., 2015. 169(1): p. 148-65
    [PMID:25995326]