PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01003361G0120
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 539aa    MW: 59489.1 Da    PI: 8.6833
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01003361G0120genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.12.9e-11188216533
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                      k  rr+++NReAAr+sR+RKka+i++Le 
  PH01003361G0120 188 KTLRRLAQNREAARKSRLRKKAYIQQLES 216
                      788************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.5E-5184242IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.852186230IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.1E-8187229No hitNo description
CDDcd147083.19E-21188240No hitNo description
SuperFamilySSF579595.56E-7188223No hitNo description
PfamPF001706.1E-8188217IPR004827Basic-leucine zipper domain
PROSITE patternPS000360191206IPR004827Basic-leucine zipper domain
PfamPF141448.8E-27273346IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 539 aa     Download sequence    Send to blast
MEYPVDLISY GKEIISSFTE VLPAVACWNH GHIGEELEED TVIPRHGAPY QIVYWSKEST  60
SYDMAEFDQA SIFLYLDGHD QPSIQEQRRQ TLNIFPSQPM HVAEPIPAAK SGGVAMAMLP  120
NGNQQVPSPK RPDQQGGQKI TAATPAKENK SSLIKEPKKC GLQKEGTSSG KGATSSPERE  180
GRKTLDHKTL RRLAQNREAA RKSRLRKKAY IQQLESSRIR LSQLEQQVQT ARVQGVLMGT  240
GDQHQLGLPS APSAAGIFDM EYGRWVEEHS KLMFQLRAAL NEHMPDNQLQ VLVNGAVAQH  300
NELLSLKGAI ARTDIFHLLC GVWASPAERC FLWLGGFRPS EVIKSLPTPL SLSVAFPIVL  360
VTVMLKHVDL LSEGQLLGIY NLQQTLQETE HALNHGMETI QQSLSDTVVA PEVPGSSFMG  420
HMSLAMNKID SMEDIVRQVR VRVRIRRTLV GGGAAKAMVA PLTTSKEEGG GQWVAATIVA  480
AHSEVADGLR QQTLHKLHHM LTTRQAARCF VAIADYFHRL RALSTLWIAR PRQEGPAM*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01003361G0120
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015651202.10.0transcription factor TGAL7 isoform X1
SwissprotQ6H4340.0TGAL7_ORYSJ; Transcription factor TGAL7
TrEMBLA0A0E0LZ880.0A0A0E0LZ88_ORYPU; Uncharacterized protein
STRINGOPUNC09G03170.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-119bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]