 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PH01001129G0380 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
|
| Family |
GATA |
| Protein Properties |
Length: 232aa MW: 26026.7 Da PI: 9.2322 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PH01001129G0380 | genome | ICBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 26.7 | 7.7e-09 | 175 | 194 | 1 | 20 |
GATA 1 CsnCgttkTplWRrgpdgnk 20
Cs C+ttkTplWR+gp g+k
PH01001129G0380 175 CSDCNTTKTPLWRSGPCGPK 194
****************9997 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MSTIYMSQLS TLPLMEGDQD QGHFPAFHLL AKDPPILFPF MINSPVEHQG QSYGDQHLRH 60
QVLGESNQQF NDHMMMGGSD AFPTPAQFRP TIQSIGSDMM QRSSYHPYDI ENKRADGSAS 120
KWTSTTPPAK MRIVRKATND TEGGAARKPR RRAQAYQADE SQKQQQLAMG VIRVCSDCNT 180
TKTPLWRSGP CGPKVKLLSR HPLSLIFMCS MCNFASYRVL QVVTLIPSTQ HI
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters (By similarity). Influences the expression of nuclear encoded chloroplast-targeted genes. Regulates chloroplast development and promotes chlorophyll accumulation. Modulates plant architecture (e.g. height, length and width of leaf blades, and flowering tillers production) and represses tillering, probably by modulating number of cells. Promotes senescence. Involved in grain filling, panicle development and starch production (PubMed:23548780). {ECO:0000250|UniProtKB:Q9SZI6, ECO:0000269|PubMed:23548780}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by light, nitrogen, and cytokinin (benzyladenine) treatments, but repressed by darkness and gibberellin (GA). {ECO:0000269|PubMed:23548780}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FP092238 | 0.0 | FP092238.1 Phyllostachys edulis cDNA clone: bphylf025c09, full insert sequence. |
