PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PH01000682G0190 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family | bZIP | ||||||||
Protein Properties | Length: 199aa MW: 22466.2 Da PI: 8.7157 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.6 | 1.1e-12 | 92 | 150 | 3 | 61 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 e +r rr+ +NRe+ArrsR RK++++ +L v L N++L ++l++ ++++ PH01000682G0190 92 EERRKRRMVSNRESARRSRMRKQKQMSQLWAQVVHLRDTNRDLLDRLNRAIRDCDRVLR 150 56899******************************************998888877665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.6E-10 | 90 | 154 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.9E-10 | 92 | 147 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.979 | 92 | 155 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.41E-10 | 94 | 142 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.9E-8 | 94 | 166 | No hit | No description |
CDD | cd14702 | 2.46E-14 | 95 | 146 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 97 | 112 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence Send to blast |
MYPGEVASVV LPYLLPAART ASFGPHYHIA ADDHLLFQYS SSNLVLPYSA AHCLQHGGEP 60 FLDRAGPPVV RNVSNSDESA DGDRQRRLQL AEERRKRRMV SNRESARRSR MRKQKQMSQL 120 WAQVVHLRDT NRDLLDRLNR AIRDCDRVLR ESSRLRDERA ELQRRLEELP VVDDGAVSVA 180 VDVAGDGDDQ PARMVATN* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 93 | 114 | RRKRRMVSNRESARRSRMRKQK |
2 | 106 | 113 | RRSRMRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00647 | PBM | Transfer from LOC_Os02g49560 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PH01000682G0190 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002454348.1 | 2e-58 | basic leucine zipper 43 | ||||
TrEMBL | A0A287W919 | 9e-61 | A0A287W919_HORVV; Uncharacterized protein | ||||
STRING | Pavir.Aa00472.1.p | 4e-58 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13600.1 | 2e-08 | basic leucine-zipper 58 |