PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PH01000644G0440 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 259aa MW: 28337 Da PI: 9.4596 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.7 | 1.9e-11 | 118 | 149 | 3 | 34 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeek 34 + k rr+++NReAAr+sR+RKka+i++Le+ PH01000644G0440 118 DAKTLRRLAQNREAARKSRLRKKAYIQNLETS 149 67999************************973 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.4E-8 | 116 | 183 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 8.8E-10 | 116 | 166 | No hit | No description |
PROSITE profile | PS50217 | 8.554 | 118 | 155 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.3E-8 | 119 | 159 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.88E-8 | 122 | 171 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 123 | 138 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 4.2E-30 | 185 | 257 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 259 aa Download sequence Send to blast |
MAELDHLFLY LSSQDQTSVQ EQPLTLNIFP SQPMHAVEPS PKGSMGTNSA SGMVADSSKR 60 PPSNQPSSRP VPAPEQLASG KVDGKAAVKR EVASGSGGKQ QGGTPPSTSE HEGPRTPDAK 120 TLRRLAQNRE AARKSRLRKK AYIQNLETSR IRLSQLEQET QRSRTQAVWF DGEYARWLDE 180 HHEMMSYLRA AVGEHAADGH LRQLVDAAVA HHGVLMELKA ALAKADVFHL VSGTWLSPAE 240 RCFLWIGGFR PSELIKVC* |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | PH01000644G0440 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_015626935.1 | 1e-107 | transcription factor TGAL9-like isoform X1 | ||||
Swissprot | Q0E342 | 1e-110 | TGAL9_ORYSJ; Transcription factor TGAL9 | ||||
TrEMBL | B8AJB3 | 1e-108 | B8AJB3_ORYSI; Uncharacterized protein | ||||
TrEMBL | I1NY70 | 1e-109 | I1NY70_ORYGL; Uncharacterized protein | ||||
STRING | ONIVA02G08860.1 | 1e-108 | (Oryza nivara) | ||||
STRING | ORGLA02G0067600.1 | 1e-109 | (Oryza glaberrima) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12972 | 21 | 26 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G06839.3 | 3e-72 | bZIP family protein |
Publications ? help Back to Top | |||
---|---|---|---|
|