PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PH01000575G0620 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family | bZIP | ||||||||
Protein Properties | Length: 170aa MW: 19011.7 Da PI: 9.2395 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.8 | 1.2e-13 | 36 | 91 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 +lkr rr+++NR +A+ sR+RK++ ++ L+ v +L+ eN++L+ +l+ + +a+ PH01000575G0620 36 DLKRKRRMESNRRSAKVSRLRKQKHLDDLTSQVNQLTRENQQLITTLNITVQSYAA 91 69******************************************998866666555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.4E-10 | 31 | 80 | No hit | No description |
SMART | SM00338 | 4.8E-13 | 34 | 98 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.013 | 36 | 78 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.0E-11 | 37 | 83 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.87E-11 | 38 | 89 | No hit | No description |
CDD | cd14702 | 3.17E-15 | 39 | 90 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence Send to blast |
MTLSGGTPPS GTSSGSSHGT RSSGSEADME LQARMDLKRK RRMESNRRSA KVSRLRKQKH 60 LDDLTSQVNQ LTRENQQLIT TLNITVQSYA AAEAQNSVMR TQLMELESRL CALREIICIM 120 NSNKFANATT TTYPSTMMTA TTPNYDLLGE IAWIPGMQMM QQPIDLLYQC |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PH01000575G0620 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | FP095688 | 0.0 | FP095688.1 Phyllostachys edulis cDNA clone: bphyem205h23, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025822603.1 | 3e-75 | bZIP transcription factor 44-like isoform X1 | ||||
TrEMBL | A0A2S3I209 | 7e-74 | A0A2S3I209_9POAL; Uncharacterized protein | ||||
STRING | Sb07g015450.1 | 1e-71 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3740 | 32 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.1 | 3e-25 | basic leucine-zipper 44 |