PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000353G0690
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 359aa    MW: 37912.7 Da    PI: 9.2364
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000353G0690genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.65.4e-082983362563
                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  25 kaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      +ae ee +++++ L++eN++Lk+el++l++++++l+se+
  PH01000353G0690 298 QAEWEEVATRADLLKQENSSLKEELKQLQEKCDSLTSEN 336
                      78999********************************98 PP
2bZIP_119.81.8e-063193482554
                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  25 kaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                      k+e+++L+ek+++L++eN++L ++l+el+ 
  PH01000353G0690 319 KEELKQLQEKCDSLTSENTSLHEKLKELEG 348
                      799************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077776.1E-281101IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165963.3E-18140268No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MGKGDVATRS KSQKSSATRN EQGTPTNPPT AYTDWSQFQA YYNAAGTAPM TPPAFFHSTV  60
APSPQGHPYM WGPQMMPHYG TPPPYAAMYA QGTPYQQAPL PPGSHPYSPY PVQSPNGTVQ  120
TPTSGAGGTE TDKSSKNKRK TPLKRSKGSL GSLDVVTTKN KKAPAKPLAS SSNEGSSQSE  180
SGSRSYSNGS STNSKSGSRA KDDSEHGQGN DASNKGVTAQ SSAVEPTQAA SGPVALNPMM  240
PYWPVPPPMA GPATSLNMGM DYWGAPTSVS MHGKVIAAST SAPSSNSRDI VPSDPAIQAE  300
WEEVATRADL LKQENSSLKE ELKQLQEKCD SLTSENTSLH EKLKELEGEK SNGNRYKQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000353G0690
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0968160.0FP096816.1 Phyllostachys edulis cDNA clone: bphylf044i09, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015632857.10.0bZIP transcription factor 16 isoform X1
RefseqXP_015632859.10.0bZIP transcription factor 16 isoform X1
RefseqXP_015632860.10.0bZIP transcription factor 16 isoform X1
RefseqXP_015632861.10.0bZIP transcription factor 16 isoform X1
RefseqXP_025879940.10.0bZIP transcription factor 16 isoform X1
RefseqXP_025879941.10.0bZIP transcription factor 16 isoform X1
TrEMBLA0A0E0BSB40.0A0A0E0BSB4_9ORYZ; Uncharacterized protein
STRINGOGLUM12G12370.10.0(Oryza glumipatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP115063238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.16e-51basic region/leucine zipper transcription factor 16