PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000166G0160
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 147aa    MW: 15656.8 Da    PI: 9.7595
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000166G0160genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.96.6e-113375547
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47
                     ++ rrk++NR++A+rsR+RK+ +++eL+  v +L a N a++ 
  PH01000166G0160 33 RKRRRKESNRLSAQRSRERKQRQLDELTAQVSALRARNGAMAA 75
                     5789**********************************99875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-112993IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.1E-83173No hitNo description
PROSITE profilePS5021710.2663194IPR004827Basic-leucine zipper domain
PfamPF001701.3E-83375IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.59E-83378No hitNo description
CDDcd147023.73E-123471No hitNo description
PROSITE patternPS0003603651IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MASPGVVSAI TTLSAGSEGA GEAQRAVVVL DERKRRRKES NRLSAQRSRE RKQRQLDELT  60
AQVSALRARN GAMAAAAHDA ARRCAAFQAE NELLRARTLE LGARLQSLTD LAQCMEAATA  120
SSPFPGVGAV VPQPPLLDAA MYCNYY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13236RKRRR
23238RKRRRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000166G0160
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004968894.13e-45ocs element-binding factor 1
TrEMBLA0A1E5VQF23e-50A0A1E5VQF2_9POAL; Uncharacterized protein
STRINGSi003289m1e-44(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP137572428
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-21basic leucine-zipper 44