PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.F01627.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | bZIP | ||||||||
Protein Properties | Length: 356aa MW: 37487.5 Da PI: 8.4252 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.4 | 1.7e-14 | 277 | 328 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N +L+k+ ee+ ++ Pahal.F01627.1 277 RRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKELNAELQKKQEEIMEMQ 328 79*******************************************9999986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.8E-13 | 273 | 337 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.944 | 275 | 326 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.0E-13 | 277 | 329 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 2.37E-26 | 277 | 331 | No hit | No description |
SuperFamily | SSF57959 | 2.04E-10 | 277 | 326 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-14 | 277 | 326 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 280 | 295 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 356 aa Download sequence Send to blast |
MDLKDGERRG AAGPGPLSRQ GSIYSLTFDE FQSTLGGMGG GLGKDFGSMN MDELLRSIWT 60 AEESQAMALA SASASAAGAA GEDGAALQRQ GSLTLPRTLS VKTVDEVWRD FVREGPPPGT 120 AGGAEPQPSR QPTLGEMTLE EFLVRAGVVR DNPAAAAMAA AVPAQPVAPR PIQAVSNGAS 180 IFFGNFGAAN DAGAGAMGFA PVRIEDQGMG NGLMPGVAGM PSAAVTVSPV DTSVAQLDSV 240 GKGNGDLSSP MAPVPYPFEG VIRGRRSGAG VEKVVERRQR RMIKNRESAA RSRARKQAYT 300 MELEAEVQKL KELNAELQKK QEEIMEMQKN QVLEVVSNPY AQKKRCLRRT LTGPW* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269|PubMed:10611387}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By abscisic acid (ABA). {ECO:0000269|PubMed:10611387}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT039652 | 0.0 | BT039652.1 Zea mays full-length cDNA clone ZM_BFc0037E11 mRNA, complete cds. | |||
GenBank | EU964768 | 0.0 | EU964768.1 Zea mays clone 281458 bZIP transcription factor ABI5 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025821117.1 | 0.0 | bZIP transcription factor TRAB1-like isoform X1 | ||||
Swissprot | Q6ZDF3 | 1e-150 | TRAB1_ORYSJ; bZIP transcription factor TRAB1 | ||||
TrEMBL | A0A2S3I376 | 0.0 | A0A2S3I376_9POAL; Uncharacterized protein | ||||
STRING | GRMZM2G157722_P01 | 0.0 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP706 | 38 | 147 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19290.1 | 3e-43 | ABRE binding factor 4 |
Link Out ? help Back to Top | |
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Phytozome | Pahal.F01627.1 |
Publications ? help Back to Top | |||
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