PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.F01181.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | bZIP | ||||||||
Protein Properties | Length: 419aa MW: 45405.5 Da PI: 9.1532 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.7 | 1.9e-11 | 129 | 165 | 3 | 39 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 ++k++rr+++NReAAr+sR+RKka+i++Le+ +L Pahal.F01181.1 129 RDKVQRRLAQNREAARKSRLRKKAYIQNLETSRMKLA 165 79***************************98444443 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.2E-8 | 126 | 172 | No hit | No description |
SMART | SM00338 | 0.0042 | 127 | 180 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.002 | 129 | 171 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.6E-8 | 129 | 167 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.74E-7 | 131 | 172 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 134 | 149 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 3.9E-28 | 213 | 287 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 419 aa Download sequence Send to blast |
MELYPGYLED HFNIHKLSRL QPLAASGAHP GRYANATPAA AAAGAGAMGI YGRQRHQMAA 60 AGVWGDPFRP DGDALAAVAA PVTAVAAPVD VDVETEVKFG NHLAQDDVVP VEDAPPSSDS 120 FGHDDARPRD KVQRRLAQNR EAARKSRLRK KAYIQNLETS RMKLAQLEQE LTMARRQQGA 180 HAAGGLLAPP VDPRVAAFEM EYARWVEDQK KQARELRAAL QSGAPEFQLR FLVDAALAHY 240 GALFEAKSRA ARADAFFVLS GVWRAPAERF FLWIGGFRPS ELLKVLAPQL DPLAEPQASA 300 VRMLQNTARQ LEDALSQGMN KLQQTLVDAL MTVDAPDDAA SGAGGGYAAR QMASAVGKLD 360 DLVSFVDQAD HLRQQTLRNM NKILTVPQAA RGLLALADYS QRLRALSSLW AARPREPA* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025820315.1 | 0.0 | transcription factor TGA2.3-like isoform X1 | ||||
Swissprot | A0A0P0WFC8 | 1e-124 | TGAL6_ORYSJ; Transcription factor TGAL6 | ||||
TrEMBL | A0A2S3I0L8 | 0.0 | A0A2S3I0L8_9POAL; Uncharacterized protein | ||||
TrEMBL | A0A2T7D437 | 0.0 | A0A2T7D437_9POAL; Uncharacterized protein | ||||
STRING | Si013962m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3571 | 38 | 77 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77920.1 | 1e-104 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Pahal.F01181.1 |