PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.D00863.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | bZIP | ||||||||
Protein Properties | Length: 458aa MW: 48873.4 Da PI: 9.2376 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.2 | 7.5e-13 | 145 | 187 | 5 | 44 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeaeNka 44 k rr+++NReAAr+sR+RKka+i++Le + + Le+e+++ Pahal.D00863.1 145 KTLRRLAQNREAARKSRLRKKAYIQQLESgriRLAHLEQEMQM 187 7789***********************9544489999999865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.6E-9 | 140 | 186 | No hit | No description |
SMART | SM00338 | 2.2E-4 | 141 | 194 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.577 | 143 | 173 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.2E-10 | 145 | 187 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.63E-7 | 146 | 190 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 148 | 163 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 4.9E-25 | 226 | 297 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 458 aa Download sequence Send to blast |
MAYPSTSGMV QPSSSLHGSI RRDPEGYDMP SDLDQALLLY FDGQQQAKPS IQEQQPQTLN 60 IFPSQPMHFE PSPKGSMASS VAGAQVAGPS KTSPAPPPKA GGGPLGAGKS SKASIKREGS 120 AGGKHGGGAG PSSSDQEGPR TPDPKTLRRL AQNREAARKS RLRKKAYIQQ LESGRIRLAH 180 LEQEMQMART HHQGAALWGT GTLSPDAALF NLEYERWLGD HSKVVAQLRA AAEEHRPDGE 240 LRAYADEAAS HYGALMGLKA RLAAADPLHL LSGLWKGAAE RCFLWIGGFR PSELIKVGLR 300 HVEPLAEQQA AGSRDVEQAA RRAEEALDAE LEALLRSLSE VVASDAQPPS PGVFGGQLYP 360 HHPGADAAAA GYMGMGMGMG HMHMALAMDK LATVGTFLRQ ADELRMQALQ ALRQILTARQ 420 AARCLVAVDD YFCRLRALST LWTTSRTAPQ LARGPAG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 121 | 127 | GGKHGGG |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT055042 | 0.0 | BT055042.1 Zea mays full-length cDNA clone ZM_BFc0123E11 mRNA, complete cds. | |||
GenBank | KJ727604 | 0.0 | KJ727604.1 Zea mays clone pUT5464 bZIP transcription factor (bZIP70) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025810392.1 | 0.0 | transcription factor TGAL8-like isoform X2 | ||||
Swissprot | Q69T21 | 1e-178 | TGAL8_ORYSJ; Transcription factor TGAL8 | ||||
TrEMBL | A0A2S3HHX6 | 0.0 | A0A2S3HHX6_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Db00756.1.p | 0.0 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12972 | 21 | 26 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 1e-87 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Pahal.D00863.1 |
Publications ? help Back to Top | |||
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