PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.C01202.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | bZIP | ||||||||
Protein Properties | Length: 145aa MW: 15972 Da PI: 10.2721 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.3 | 2.2e-15 | 25 | 84 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+ +NRe+ArrsR+RK++++eeL +v+ L+aeN + ++++ + e +k++ e+ Pahal.C01202.2 25 ERKRKRMLSNRESARRSRARKQQRLEELVAEVARLQAENAQVQSRIATFDREFSKVDGEN 84 46789999**************************************99999999887766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.2E-19 | 22 | 86 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.3E-13 | 24 | 79 | No hit | No description |
PROSITE profile | PS50217 | 12.07 | 24 | 87 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.81E-11 | 26 | 78 | No hit | No description |
Pfam | PF00170 | 1.2E-11 | 26 | 80 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 29 | 44 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence Send to blast |
MSSRRSSSPE SNTDSGSGGG FAADERKRKR MLSNRESARR SRARKQQRLE ELVAEVARLQ 60 AENAQVQSRI ATFDREFSKV DGENAVLRAR HGELAGRLES LGSVLEVLQM AGAPVDIPEI 120 PDPLLRPWQP PFPMQPIAAD AFQF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 38 | 45 | RRSRARKQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025807736.1 | 4e-99 | bZIP transcription factor 53-like | ||||
TrEMBL | A0A2S3H7P6 | 9e-98 | A0A2S3H7P6_9POAL; Uncharacterized protein | ||||
TrEMBL | A0A2T7E7P9 | 9e-98 | A0A2T7E7P9_9POAL; Uncharacterized protein | ||||
STRING | Si023562m | 3e-79 | (Setaria italica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G62420.1 | 5e-30 | basic region/leucine zipper motif 53 |
Link Out ? help Back to Top | |
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Phytozome | Pahal.C01202.2 |