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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Pahal.A02787.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
ERF |
| Protein Properties |
Length: 301aa MW: 31166.9 Da PI: 6.1489 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.A02787.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 60.2 | 4.7e-19 | 145 | 195 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp +ng +r++lg++++ae+Aa a+++a+ +++g
Pahal.A02787.1 145 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYDSAEDAAVAYDRAAYRMRG 195
8********.***********9987..*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MLLNPACEAA ALDSIRHHLL DEPAAASAAP RPVYRRSTSF GSLVADQWSE SLPFRPDDAD 60
DMVVFGALRD AFSRGWLPDG SFAAVKPEPP ASPDSPYEFG SCLGGRGLPV SPEEEEPETP 120
TAGAASAAMT PGGSEEAAAV GRGKHYRGVR QRPWGKFAAE IRDPAKNGAR VWLGTYDSAE 180
DAAVAYDRAA YRMRGSRALL NFPLRIGSEI AAAAAAAATA PAPAVGEKRP SAEPAASSDS 240
SSPLSSSSSS GTPKRRKRGE AAAATMAMAL VPPTPAQPPV QLTLPVHPWF AAGPAQQLVS 300
*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Acts as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by ethephon (ethylene-releasing compound) in buds and to a lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by both protein kinases and protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KJ727714 | 1e-139 | KJ727714.1 Zea mays clone pUT5653 AP2-EREBP transcription factor (EREB195) gene, partial cds. |
