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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Pahal.A00861.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
GATA |
| Protein Properties |
Length: 340aa MW: 36610.8 Da PI: 9.893 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.A00861.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 60.3 | 2.5e-19 | 176 | 209 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
Pahal.A00861.1 176 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 209
*******************************987 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0009416 | Biological Process | response to light stimulus |
| GO:0009735 | Biological Process | response to cytokinin |
| GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
| GO:0009910 | Biological Process | negative regulation of flower development |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0010380 | Biological Process | regulation of chlorophyll biosynthetic process |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 340 aa
Download sequence Send
to blast |
MSTIYMSQLS TLPLMEGEKD QGLFPAFDVM KDPPILFPFM INNPVDQLQG QSSYGDQRLR 60
HQVLAESTHQ QFTDRMMMSG SDVFPRPSPF RPTIQSIDGD MIQRSAYDPY DIENKRADGS 120
ISGWAVAPPA KMKIMRKATS EYPEGGAARK PRRRAQAHQD ESQQLQQQAM GVVRVCSDCN 180
TTKTPLWRSG PRGPKSLCNA CGIRQRKARR AMAAAAAAAA ASNGGAPQVA SVASQAKPAK 240
KEKRADVDQS LPFKKRCKMV AVDHAVTAAK ATPTVAAPTK QDQDHVSSDK VAAAATAVSL 300
QSKVATPDPP AMSIHAFPAD EITDAAMLLM TLSCGLVRS*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters (By similarity). Influences the expression of nuclear encoded chloroplast-targeted genes. Regulates chloroplast development and promotes chlorophyll accumulation. Modulates plant architecture (e.g. height, length and width of leaf blades, and flowering tillers production) and represses tillering, probably by modulating number of cells. Promotes senescence. Involved in grain filling, panicle development and starch production (PubMed:23548780). {ECO:0000250|UniProtKB:Q9SZI6, ECO:0000269|PubMed:23548780}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by light, nitrogen, and cytokinin (benzyladenine) treatments, but repressed by darkness and gibberellin (GA). {ECO:0000269|PubMed:23548780}. |
