PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pgl014408 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | VOZ | ||||||||
Protein Properties | Length: 155aa MW: 17856.1 Da PI: 6.92 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 286.5 | 2.7e-88 | 1 | 147 | 71 | 217 |
VOZ 71 qgkevgipecegaatakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhly 170 q k+vgipecegaatakspwna elfd+ +l+ge +rewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmk+fgglkrsyymdpqps++fewhly Pgl014408 1 QEKSVGIPECEGAATAKSPWNAHELFDMDVLQGEPVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKDFGGLKRSYYMDPQPSTQFEWHLY 100 679************************************************************************************************* PP VOZ 171 eyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 eyein++da+alyrlelk+v +kk++kgkv d+l+dlq++lg+l+a Pgl014408 101 EYEINDCDACALYRLELKMVCSKKNTKGKVGGDPLVDLQHQLGQLSA 147 *********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence Send to blast |
QEKSVGIPEC EGAATAKSPW NAHELFDMDV LQGEPVREWL FFDKPRRAFE SGNRKQRSLP 60 DYSGRGWHES RKQVMKDFGG LKRSYYMDPQ PSTQFEWHLY EYEINDCDAC ALYRLELKMV 120 CSKKNTKGKV GGDPLVDLQH QLGQLSASYL QSYPG |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008383671.1 | 2e-84 | transcription factor VOZ1 | ||||
Refseq | XP_008383672.1 | 2e-84 | transcription factor VOZ1 | ||||
Swissprot | Q9SGQ0 | 7e-81 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A199VTN3 | 1e-83 | A0A199VTN3_ANACO; Transcription factor VOZ1 | ||||
TrEMBL | A0A2I4HG63 | 1e-82 | A0A2I4HG63_JUGRE; transcription factor VOZ1-like | ||||
TrEMBL | A0A498ISJ3 | 2e-82 | A0A498ISJ3_MALDO; Uncharacterized protein | ||||
STRING | XP_008383671.1 | 9e-84 | (Malus domestica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 3e-83 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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