PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Pgl012351 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bZIP | ||||||||||||
Protein Properties | Length: 248aa MW: 27671.8 Da PI: 6.8625 | ||||||||||||
Description | bZIP family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.5 | 2.8e-13 | 111 | 169 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ rr+ +NRe+ArrsR RK++ ++eL+ v+ + +eN++ + + l++ +++ e+ Pgl012351 111 RKKRRMLSNRESARRSRMRKQKHLDELRAQVAHMRGENRQILSSFDILTQRYSQALEEN 169 6789*********************************************9999887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.7E-15 | 107 | 171 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.737 | 109 | 172 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.9E-8 | 109 | 161 | No hit | No description |
SuperFamily | SSF57959 | 1.13E-11 | 111 | 162 | No hit | No description |
Pfam | PF00170 | 1.5E-10 | 111 | 169 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 7.94E-20 | 112 | 163 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 114 | 129 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence Send to blast |
MQSEQVLLPL SPMISNGSFH MGVVDSRGGQ DFFSRECYES LLNYNNFMSY PPPALNNNNS 60 GSSPEVCKPL SKGGRYIRQD SVASSSHSAQ TACNSASDEA EEQQIGMIDE RKKRRMLSNR 120 ESARRSRMRK QKHLDELRAQ VAHMRGENRQ ILSSFDILTQ RYSQALEENR VLKAQGMELS 180 QQLHQLQQAI AASQSSAAAS PFVLNAFHHN NNNNIINIDE AVDTNTNSLS QCLISCSDNM 240 IPCSDNTI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 110 | 131 | RKKRRMLSNRESARRSRMRKQK |
2 | 123 | 130 | RRSRMRKQ |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Pgl.25727 | 0.0 | stem |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | H9MB62 | 1e-63 | H9MB62_PINRA; Uncharacterized protein (Fragment) | ||||
TrEMBL | H9WH21 | 1e-63 | H9WH21_PINTA; Uncharacterized protein (Fragment) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 2e-26 | basic leucine-zipper 42 |